RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 APBB3O95704 486 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 TKTP29401 623 aaKnown RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 MAPK8P45983 427 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 EPHA5P54756 1037 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 USP39Q53GS9 565 aaKnown RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 ARID3BQ8IVW6 561 aaPredicted RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 UBL7Q96S82 380 aaPredicted RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 ZMYND12Q9H0C1 365 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 CEP72Q9P209 647 aa13.93□□□□□ -0.18
AC004540.1-204ENST00000449537 A0A1B0GUA9 196 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 ESYT2A0FGR8 921 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 PTGESO14684 152 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 DHPSP49366 369 aaPredicted RBP13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 USP11P51784 963 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 POU5F1BQ06416 359 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 TNK2Q07912 1038 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 TFDP1Q14186 410 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 AMHR2Q16671 573 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 TRIM61Q5EBN2 209 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 TMEM196Q5HYL7 178 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 FSTL4Q6MZW2 842 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 SHKBP1Q8TBC3 707 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 MDM1Q8TC05 714 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 SLC39A7Q92504 469 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 DDX27Q96GQ7 796 aaKnown RBP13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 LRRC3BQ96PB8 259 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 RAI2Q9Y5P3 530 aa13.92□□□□□ -0.18
AC004540.1-204ENST00000449537 APC2O95996 2303 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 TMEM189-UBE2V1I3L0A0 370 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 B4GALT5O43286 388 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 EDIL3O43854 480 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 DKC1O60832 514 aaKnown RBP eCLIP13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 RNF40O75150 1001 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 GNA11P29992 359 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 DGKEP52429 567 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 FAM193AP78312 1265 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 MBTD1Q05BQ5 628 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 TWF1Q12792 350 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 HNRNPDQ14103 355 aaKnown RBP13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 EMC2Q15006 297 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 NAB2Q15742 525 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 TPGS2Q68CL5 300 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 B3GNT9Q6UX72 402 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 SMC5Q8IY18 1101 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
AC004540.1-204ENST00000449537 I3L4J1 428 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 TRDMT1O14717 391 aaKnown RBP13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 C1QL1O75973 258 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 ENGP17813 658 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 RTN1Q16799 776 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 SYT13Q7L8C5 426 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 THG1LQ9NWX6 298 aaKnown RBP13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 OBP2AQ9NY56 170 aa13.9□□□□□ -0.18
AC004540.1-204ENST00000449537 A0A1W2PRU2 124 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 H7C4K7 107 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 EGFP01133 1207 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 PRKCBP05771 671 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 BRCC3P46736 316 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 CLCNKBP51801 687 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 ATXN3P54252 364 aaPredicted RBP13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 CD300LGQ6UXG3 332 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 ADAMTS14Q8WXS8 1223 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 MTRQ99707 1265 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 CXCL16Q9H2A7 254 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 MAFFQ9ULX9 164 aa13.89□□□□□ -0.19
AC004540.1-204ENST00000449537 GON4LQ3T8J9 2241 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 PI4KAP42356 2102 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 AMPD2Q01433 879 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 DMC1Q14565 340 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 Q4G0T1 1027 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 FBXO43Q4G163 708 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 XKR9Q5GH70 373 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 APOA5Q6Q788 366 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 GKN1Q9NS71 199 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 IGSF5Q9NSI5 407 aa13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms