RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MYL6P60660 151 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 GRIK3Q13003 919 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 IKBKEQ14164 716 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 COL13A1Q5TAT6 717 aaPredicted RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 GJB7Q6PEY0 223 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 CCDC112Q8NEF3 446 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 C18orf25Q96B23 403 aaPredicted RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 PI4K2AQ9BTU6 479 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 HTATIP2Q9BUP3 242 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 GPR88Q9GZN0 384 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 FAM124BQ9H5Z6 455 aaPredicted RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 NLRC4Q9NPP4 1024 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 RNF19AQ9NV58 838 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 SCN1AP35498 2009 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 LRRC53A6NM62 1247 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 F8VZ95 297 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 POLR2BP30876 1174 aaKnown RBP20.72■□□□□ 0.91
RPS28-202ENST00000449223 AFF1P51825 1210 aaKnown RBP20.72■□□□□ 0.91
RPS28-202ENST00000449223 CDK17Q00537 523 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 SOX4Q06945 474 aaPredicted RBP20.72■□□□□ 0.91
RPS28-202ENST00000449223 GOLGA8FQ08AF8 430 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 GOLGA8DPQ0D2H9 430 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 C9orf57Q5W0N0 161 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 GLB1LQ6UWU2 654 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 RRAGAQ7L523 313 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 TMEM139Q8IV31 216 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 PPM1KQ8N3J5 372 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 TATDN2Q93075 761 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 KREMEN1Q96MU8 473 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 UBE2TQ9NPD8 197 aaPredicted RBP20.72■□□□□ 0.91
RPS28-202ENST00000449223 MIOSQ9NXC5 875 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 PRKAG2Q9UGJ0 569 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 NUB1Q9Y5A7 615 aa20.72■□□□□ 0.91
RPS28-202ENST00000449223 HOXA2O43364 376 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 SCNN1GP51170 649 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 GUCY2FP51841 1108 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 MFAP3P55082 362 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 LRMPQ12912 555 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 ZNF699Q32M78 642 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 CLLU1OSQ5K130 101 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 WDR59Q6PJI9 974 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 NPAS4Q8IUM7 802 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 SHC3Q92529 594 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 SPAG5Q96R06 1193 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 NIF3L1Q9GZT8 377 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 KCNF1Q9H3M0 494 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 IL23AQ9NPF7 189 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 KANSL3Q9P2N6 904 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 AGAP1Q9UPQ3 857 aa20.71■□□□□ 0.91
RPS28-202ENST00000449223 FNDC1Q4ZHG4 1894 aaPredicted RBP20.71■□□□□ 0.91
RPS28-202ENST00000449223 BAIAP3O94812 1187 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 KRT19P08727 400 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 PNPLA4P41247 253 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 CCZ1BP86790 482 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 CCZ1P86791 482 aaPredicted RBP20.7■□□□□ 0.9
RPS28-202ENST00000449223 CUL2Q13617 745 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 DRAP1Q14919 205 aaPredicted RBP20.7■□□□□ 0.9
RPS28-202ENST00000449223 SPOPLQ6IQ16 392 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 RNF169Q8NCN4 708 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 PCDHB7Q9Y5E2 793 aa20.7■□□□□ 0.9
RPS28-202ENST00000449223 RPL9P32969 192 aaKnown RBP20.69■□□□□ 0.9
RPS28-202ENST00000449223 STAT1P42224 750 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 MYO1EQ12965 1108 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 PPIGQ13427 754 aaKnown RBP eCLIP20.69■□□□□ 0.9
RPS28-202ENST00000449223 RAPGEF1Q13905 1077 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 TSR1Q2NL82 804 aaKnown RBP20.69■□□□□ 0.9
RPS28-202ENST00000449223 E4F1Q66K89 784 aaPredicted RBP20.69■□□□□ 0.9
RPS28-202ENST00000449223 UBR7Q8N806 425 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 KAT5Q92993 513 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 HPDLQ96IR7 371 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 ZNF560Q96MR9 790 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 BCO2Q9BYV7 579 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 CNTN6Q9UQ52 1028 aa20.69■□□□□ 0.9
RPS28-202ENST00000449223 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
RPS28-202ENST00000449223 SOX5P35711 763 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 PRKCIP41743 596 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 ASPAP45381 313 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 DSC1Q08554 894 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 TUSC3Q13454 348 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 ZNF667Q5HYK9 610 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 NOMO2Q5JPE7 1267 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 SFMBT2Q5VUG0 894 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 FAM71AQ8IYT1 594 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 TMEM130Q8N3G9 435 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 TRIM44Q96DX7 344 aaPredicted RBP20.68■□□□□ 0.9
RPS28-202ENST00000449223 UROC1Q96N76 676 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 BAG1Q99933 345 aaPredicted RBP20.68■□□□□ 0.9
RPS28-202ENST00000449223 COL4A6Q14031 1691 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 NRDCO43847 1150 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 FGFR1P11362 822 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 P4HA1P13674 534 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 ACO1P21399 889 aaKnown RBP20.68■□□□□ 0.9
RPS28-202ENST00000449223 PAX3P23760 479 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 WDR72Q3MJ13 1102 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 HGSNATQ68CP4 663 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 IRF2BP2Q7Z5L9 587 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 TMTC1Q8IUR5 882 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 URGCPQ8TCY9 931 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 DDX27Q96GQ7 796 aaKnown RBP20.68■□□□□ 0.9
RPS28-202ENST00000449223 CASD1Q96PB1 797 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms