RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PPP2R3AQ06190 1150 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 VARS2Q5ST30 1063 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 ANKS3Q6ZW76 656 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 ZDHHC14Q8IZN3 488 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 PRKD2Q9BZL6 878 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 ZDHHC7Q9NXF8 308 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 FAM13BQ9NYF5 915 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
RTFDC1-204ENST00000449062 PVALEFA0A1B0GWK0 134 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 SPTLC1O15269 473 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 N4BP1O75113 896 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 OAZ2O95190 189 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 NFICP08651 508 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 UVSSAQ2YD98 709 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 UNC13DQ70J99 1090 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 POMGNT1Q8WZA1 660 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 EDAQ92838 391 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 BORCS6Q96GS4 357 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 CBWD1Q9BRT8 395 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 PCDHB8Q9UN66 801 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 C2CD2Q9Y426 696 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 CDY1Q9Y6F8 540 aa15.28■□□□□ 0.04
RTFDC1-204ENST00000449062 MTCL1Q9Y4B5 1905 aaKnown RBP15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 PLXNA3P51805 1871 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 A0A1B0GVL5 298 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 KLRC4O43908 158 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 LILRA4P59901 499 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 ASIC1P78348 528 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 KRT85P78386 507 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 CUL4BQ13620 913 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 TMEM31Q5JXX7 168 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 C9orf57Q5W0N0 161 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 RTL10Q7L3V2 364 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 EFCAB13Q8IY85 973 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 GRAMD1CQ8IYS0 662 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 CXorf38Q8TB03 319 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 PAGE5Q96GU1 130 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 SPATA32Q96LK8 384 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 TMEM206Q9H813 350 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 FBXL5Q9UKA1 691 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 NR2E1Q9Y466 385 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 NUB1Q9Y5A7 615 aa15.27■□□□□ 0.04
RTFDC1-204ENST00000449062 DOCK6Q96HP0 2047 aa15.27■□□□□ 0.03
RTFDC1-204ENST00000449062 FAM86C2PA6NEL3 165 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 EIF3DO15371 548 aaKnown RBP eCLIP15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 POU2F2P09086 479 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 HNRNPA1P09651 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 PFKFB1P16118 471 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 SP100P23497 879 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 HOXA9P31269 272 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 ZXDAP98168 799 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 ROR1Q01973 937 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 TMEM132DQ14C87 1099 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 FAM26FQ5R3K3 315 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 ELMSAN1Q6PJG2 1045 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 BEST2Q8NFU1 509 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 SCFD1Q8WVM8 642 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 SMG7Q92540 1137 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 PYM1Q9BRP8 204 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 FAM213AQ9BRX8 229 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 SCAND2PQ9GZW5 306 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 LIMD1Q9UGP4 676 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 CACNA1HO95180 2353 aa15.26■□□□□ 0.03
RTFDC1-204ENST00000449062 PDCD11Q14690 1871 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 WDR27A2RRH5 827 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 H7C4K7 107 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 XPOTO43592 962 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 EXTL3O43909 919 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 IL18RAPO95256 599 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 LDHAP00338 332 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 PAX3P23760 479 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 MCM4P33991 863 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 AFMP43652 599 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 BECN1Q14457 450 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 PTPN21Q16825 1174 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 BMT2Q1RMZ1 405 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 OTOP3Q7RTS5 596 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 NT5DC4Q86YG4 428 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 BRSK2Q8IWQ3 736 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 SYCP3Q8IZU3 236 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 APPL2Q8NEU8 664 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 PCIF1Q9H4Z3 704 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 TSHZ2Q9NRE2 1034 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 DPP3Q9NY33 737 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
RTFDC1-204ENST00000449062 ATP6V1DQ9Y5K8 247 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms