RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 SLC5A9Q2M3M2 681 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 RILPL1Q5EBL4 403 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 ZPBP2Q6X784 338 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 USP37Q86T82 979 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 SUMF1Q8NBK3 374 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 SMARCD2Q92925 531 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 RMDN1Q96DB5 314 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 CDK5RAP3Q96JB5 506 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 TBC1D32Q96NH3 1257 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 PLA2G2FQ9BZM2 168 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 TRPV5Q9NQA5 729 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 HEBP1Q9NRV9 189 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 KCND2Q9NZV8 630 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 LARSQ9P2J5 1176 aaKnown RBP14.51□□□□□ -0.09
HMGB3-204ENST00000448905 INSL5Q9Y5Q6 135 aa14.51□□□□□ -0.09
HMGB3-204ENST00000448905 ZNF263O14978 683 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 XPOTO43592 962 aaKnown RBP14.5□□□□□ -0.09
HMGB3-204ENST00000448905 SEC24AO95486 1093 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 CLTAP09496 248 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 CPB1P15086 417 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 CEBPBP17676 345 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 PSMC3P17980 439 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 SCP2P22307 547 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 PAX3P23760 479 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 YWHAHQ04917 246 aaPredicted RBP14.5□□□□□ -0.09
HMGB3-204ENST00000448905 PLD1Q13393 1074 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 NOLC1Q14978 699 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGB3-204ENST00000448905 SLC10A6Q3KNW5 377 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 FAM78AQ5JUQ0 283 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 MCTP1Q6DN14 999 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 YAF2Q8IY57 180 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 DAW1Q8N136 415 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 DEPDC1BQ8WUY9 529 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 DDX12PQ92771 950 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 C18orf25Q96B23 403 aaPredicted RBP14.5□□□□□ -0.09
HMGB3-204ENST00000448905 TSPAN18Q96SJ8 248 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 IER2Q9BTL4 223 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 ASAH2Q9NR71 780 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 ANKFY1Q9P2R3 1169 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 PCDHB8Q9UN66 801 aa14.5□□□□□ -0.09
HMGB3-204ENST00000448905 DOCK6Q96HP0 2047 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 SPTBN4Q9H254 2564 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 DCHS1Q96JQ0 3298 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 MYL4P12829 197 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 TARSP26639 723 aaKnown RBP14.49□□□□□ -0.09
HMGB3-204ENST00000448905 CDC25AP30304 524 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 ALDH1A3P47895 512 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 TOB1P50616 345 aaPredicted RBP14.49□□□□□ -0.09
HMGB3-204ENST00000448905 EPHB3P54753 998 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 TWF1Q12792 350 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 PRSS36Q5K4E3 855 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 ARMCX5Q6P1M9 558 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 C1orf228Q6PIY5 440 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 TAS1R3Q7RTX0 852 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 DCLK2Q8N568 766 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 SYT2Q8N9I0 419 aaPredicted RBP14.49□□□□□ -0.09
HMGB3-204ENST00000448905 ZBTB44Q8NCP5 570 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 FAM3CQ92520 227 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 BICD1Q96G01 975 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 ZBTB45Q96K62 511 aaPredicted RBP14.49□□□□□ -0.09
HMGB3-204ENST00000448905 ASB16Q96NS5 453 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 SLITRK6Q9H5Y7 841 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 RAB23Q9ULC3 237 aa14.49□□□□□ -0.09
HMGB3-204ENST00000448905 TDRD15B5MCY1 1934 aaKnown RBP14.49□□□□□ -0.09
HMGB3-204ENST00000448905 OR6C75A6NL08 312 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 PP2D1A8MPX8 630 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 PRR5-ARHGAP8B1AHC4 643 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 OAZ2O95190 189 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 SEC24BO95487 1268 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 CYP3A5P20815 502 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 GDI1P31150 447 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 ARHGAP8P85298 464 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 MCL1Q07820 350 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 RAD51AP2Q09MP3 1159 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 GRM2Q14416 872 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 DSTYKQ6XUX3 929 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 MFSD6LQ8IWD5 586 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 TMEM161BQ8NDZ6 487 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 TCEAL4Q96EI5 215 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 LMAN1LQ9HAT1 526 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 TRPV4Q9HBA0 871 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 ZNF334Q9HCZ1 680 aaPredicted RBP14.48□□□□□ -0.09
HMGB3-204ENST00000448905 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.48□□□□□ -0.09
HMGB3-204ENST00000448905 UBQLN1Q9UMX0 589 aaKnown RBP14.48□□□□□ -0.09
HMGB3-204ENST00000448905 NDRG2Q9UN36 371 aaKnown RBP14.48□□□□□ -0.09
HMGB3-204ENST00000448905 MTCL1Q9Y4B5 1905 aaKnown RBP14.48□□□□□ -0.09
HMGB3-204ENST00000448905 DOCK8Q8NF50 2099 aa14.48□□□□□ -0.09
HMGB3-204ENST00000448905 COL4A3Q01955 1670 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 H3BQV1 296 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 M0QZQ0 153 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 ABLIM1O14639 778 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 FGF19O95750 216 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 PLA2G4BP0C869 781 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 MAPTP10636 758 aaKnown RBP14.47□□□□□ -0.09
HMGB3-204ENST00000448905 LRPAP1P30533 357 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 ABCD1P33897 745 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 LIG4P49917 911 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms