RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 C15orf39Q6ZRI6 1047 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
CTSS-202ENST00000448301 TMEM130Q8N3G9 435 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 PIP4P2Q8N4L2 257 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 KLHL23Q8NBE8 558 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 C3orf58Q8NDZ4 430 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 BCL7CQ8WUZ0 217 aaPredicted RBP15.15■□□□□ 0.02
CTSS-202ENST00000448301 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 TSPY26PQ9H489 355 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 TMEM8AQ9HCN3 771 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 MAGEC2Q9UBF1 373 aaPredicted RBP15.15■□□□□ 0.02
CTSS-202ENST00000448301 SIX4Q9UIU6 781 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
CTSS-202ENST00000448301 CHD7Q9P2D1 2997 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 F8W810 466 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 H3BNC9 293 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 B3GAT3O94766 335 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 ITGB1P05556 798 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 PAX3P23760 479 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 EEF1GP26641 437 aaKnown RBP15.14■□□□□ 0.01
CTSS-202ENST00000448301 POLR2BP30876 1174 aaKnown RBP15.14■□□□□ 0.01
CTSS-202ENST00000448301 GCLMP48507 274 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 RBP5P82980 135 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 UBE3AQ05086 875 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 TDRD10Q5VZ19 366 aaKnown RBP15.14■□□□□ 0.01
CTSS-202ENST00000448301 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 SV2AQ7L0J3 742 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 LRRC52Q8N7C0 313 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 FAM200AQ8TCP9 573 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 ARNTL2Q8WYA1 636 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 RABGGTAQ92696 567 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 ZNF560Q96MR9 790 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 CERS4Q9HA82 394 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 FANCLQ9NW38 375 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 STK39Q9UEW8 545 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 LZTS1Q9Y250 596 aa15.14■□□□□ 0.01
CTSS-202ENST00000448301 BECN2A8MW95 431 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 KCNJ18B7U540 433 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 PPEF2O14830 753 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 TADA2AO75478 443 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 EFEMP2O95967 443 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 KRT19P08727 400 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 PNPLA4P41247 253 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 AARSP49588 968 aaKnown RBP eCLIP15.13■□□□□ 0.01
CTSS-202ENST00000448301 TAF6P49848 677 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 MXI1P50539 228 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 KRT17Q04695 432 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 BIRC3Q13489 604 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 GPM6BQ13491 265 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 KCNJ12Q14500 433 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 TCP11X2Q5H9J9 407 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 ZNF697Q5TEC3 545 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 KRT39Q6A163 491 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 FUT10Q6P4F1 479 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 RNF168Q8IYW5 571 aaPredicted RBP15.13■□□□□ 0.01
CTSS-202ENST00000448301 HSD3B7Q9H2F3 369 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 TTYH1Q9H313 450 aaPredicted RBP15.13■□□□□ 0.01
CTSS-202ENST00000448301 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 CBX8Q9HC52 389 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 AGAP1Q9UPQ3 857 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 R3HCC1Q9Y3T6 440 aaKnown RBP15.13■□□□□ 0.01
CTSS-202ENST00000448301 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
CTSS-202ENST00000448301 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.13■□□□□ 0.01
CTSS-202ENST00000448301 SF3B1O75533 1304 aaKnown RBP eCLIP15.13■□□□□ 0.01
CTSS-202ENST00000448301 PMM2O15305 246 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 TRAPPC3O43617 180 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 PHACTR2O75167 634 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 STAU1O95793 577 aaKnown RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 AFPP02771 609 aaKnown RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 ZNF18P17022 549 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 IGFBP6P24592 240 aaPredicted RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 LILRA4P59901 499 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 SV2CQ496J9 727 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 HSP90AA4PQ58FG1 418 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 DDX53Q86TM3 631 aaKnown RBP15.12■□□□□ 0.01
CTSS-202ENST00000448301 CREBRFQ8IUR6 639 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 SPPL3Q8TCT6 385 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 HASPINQ8TF76 798 aa15.12■□□□□ 0.01
CTSS-202ENST00000448301 EPOPA6NHQ4 379 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 P4HA2O15460 535 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 VNN1O95497 513 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 CST3P01034 146 aaPredicted RBP15.11■□□□□ 0.01
CTSS-202ENST00000448301 SOD2P04179 222 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 ATICP31939 592 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 BRCC3P46736 316 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 FMO5P49326 533 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 KCNH2Q12809 1159 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 TRPC3Q13507 836 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 NCOA4Q13772 614 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 CBWD6Q4V339 395 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 CBWD3Q5JTY5 395 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 CBWD5Q5RIA9 395 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 SUSD3Q96L08 255 aa15.11■□□□□ 0.01
CTSS-202ENST00000448301 TUBGCP2Q9BSJ2 902 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms