RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 LIN9Q5TKA1 542 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 RHBDF2Q6PJF5 856 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 SPATA21Q7Z572 469 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 SUPT20HQ8NEM7 779 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
SHC1-210ENST00000448116 MFSD14AQ96MC6 490 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 A1CFQ9NQ94 594 aaKnown RBP13.71□□□□□ -0.21
SHC1-210ENST00000448116 ANKEF1Q9NU02 776 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 ZNF148Q9UQR1 794 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
SHC1-210ENST00000448116 CCDC189A1A4V9 331 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 RASA4BC9J798 803 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.22
SHC1-210ENST00000448116 RASA4O43374 803 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 ZNF862O60290 1169 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 UNGP13051 313 aaPredicted RBP13.71□□□□□ -0.22
SHC1-210ENST00000448116 GSCP56915 257 aaPredicted RBP13.71□□□□□ -0.22
SHC1-210ENST00000448116 SNRPFP62306 86 aaKnown RBP13.71□□□□□ -0.22
SHC1-210ENST00000448116 PLCB3Q01970 1234 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 SEZ6Q53EL9 994 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.22
SHC1-210ENST00000448116 ACSF2Q96CM8 615 aaPredicted RBP13.71□□□□□ -0.22
SHC1-210ENST00000448116 IFT74Q96LB3 600 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 TRIM33Q9UPN9 1127 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 NRXN2Q9P2S2 1712 aa13.71□□□□□ -0.22
SHC1-210ENST00000448116 ZSCAN5DPP0CG00 497 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 SLC8A1P32418 973 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 GBP2P32456 591 aaPredicted RBP13.7□□□□□ -0.22
SHC1-210ENST00000448116 P3H1Q32P28 736 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 TNFAIP8L3Q5GJ75 292 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 KIRREL3Q8IZU9 778 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 RBM15Q96T37 977 aaKnown RBP eCLIP13.7□□□□□ -0.22
SHC1-210ENST00000448116 MOV10L1Q9BXT6 1211 aaKnown RBP13.7□□□□□ -0.22
SHC1-210ENST00000448116 CCDC134Q9H6E4 229 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
SHC1-210ENST00000448116 PLA2G6O60733 806 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 DSG3P32926 999 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
SHC1-210ENST00000448116 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
SHC1-210ENST00000448116 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 ANKFY1Q9P2R3 1169 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 MYPNQ86TC9 1320 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 PMM2O15305 246 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 PROSCO94903 275 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 IFNB1P01574 187 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 GSTA1P08263 222 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 MAN1A1P33908 653 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 ACCSLQ4AC99 568 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 CCDC89Q8N998 374 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 TMEM143Q96AN5 459 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 ZBTB45Q96K62 511 aaPredicted RBP13.7□□□□□ -0.22
SHC1-210ENST00000448116 PXMP2Q9NR77 195 aa13.7□□□□□ -0.22
SHC1-210ENST00000448116 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
SHC1-210ENST00000448116 SFNP31947 248 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 SLC1A1P43005 524 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 WNT7BP56706 349 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
SHC1-210ENST00000448116 NCALDP61601 193 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 MFSD4BQ5TF39 518 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ARMC3Q5W041 872 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 FLAD1Q8NFF5 587 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 STAMBPL1Q96FJ0 436 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 POLR3FQ9H1D9 316 aaPredicted RBP13.69□□□□□ -0.22
SHC1-210ENST00000448116 VPS37BQ9H9H4 285 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 EXOC1LA0A1B0GW35 172 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ZBED4O75132 1171 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ETS1P14921 441 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 NQO1P15559 274 aaKnown RBP13.69□□□□□ -0.22
SHC1-210ENST00000448116 KRT15P19012 456 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 GNA15P30679 374 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 MAGEA4P43358 317 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 GCNT1Q02742 428 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 MYO1EQ12965 1108 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ARHGEF18Q6ZSZ5 1173 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ANKS1BQ7Z6G8 1248 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 GLIS1Q8NBF1 620 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 FAM81BQ96LP2 452 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 PITPNM3Q9BZ71 974 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ARL2BPQ9Y2Y0 163 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 A8MUI8 341 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 CDH16O75309 829 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 NR3C2P08235 984 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 CETN2P41208 172 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 ALDH5A1P51649 535 aaPredicted RBP13.69□□□□□ -0.22
SHC1-210ENST00000448116 MTM1Q13496 603 aa13.69□□□□□ -0.22
SHC1-210ENST00000448116 MTMR2Q13614 643 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms