RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 SUSD3Q96L08 255 aa26.08■■□□□ 1.77
MRPL28-205ENST00000447696 PYM1Q9BRP8 204 aaKnown RBP26.08■■□□□ 1.77
MRPL28-205ENST00000447696 TRIM9Q9C026 710 aa26.08■■□□□ 1.77
MRPL28-205ENST00000447696 TBC1D7Q9P0N9 293 aa26.08■■□□□ 1.77
MRPL28-205ENST00000447696 DERAQ9Y315 318 aa26.08■■□□□ 1.77
MRPL28-205ENST00000447696 TISP43B9A030 160 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 ADAM12O43184 909 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 RFPL2O75678 378 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 SP100P23497 879 aaPredicted RBP26.07■■□□□ 1.76
MRPL28-205ENST00000447696 SPAG1Q07617 926 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 LIN9Q5TKA1 542 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 PLCD3Q8N3E9 789 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 ZNF707Q96C28 371 aaPredicted RBP26.07■■□□□ 1.76
MRPL28-205ENST00000447696 PRKD2Q9BZL6 878 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 ASB7Q9H672 318 aa26.07■■□□□ 1.76
MRPL28-205ENST00000447696 ZFHX2Q9C0A1 2572 aaPredicted RBP26.07■■□□□ 1.76
MRPL28-205ENST00000447696 MTCL1Q9Y4B5 1905 aaKnown RBP26.06■■□□□ 1.76
MRPL28-205ENST00000447696 GFRA3O60609 400 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 HNRNPA1P09651 372 aaKnown RBP eCLIP26.06■■□□□ 1.76
MRPL28-205ENST00000447696 MYBP10242 640 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 ADSSP30520 456 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 HOXA9P31269 272 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 MCM4P33991 863 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 OR1D2P34982 312 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 CASP5P51878 434 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 PTPN21Q16825 1174 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 VARS2Q5ST30 1063 aaKnown RBP26.06■■□□□ 1.76
MRPL28-205ENST00000447696 STXBP4Q6ZWJ1 553 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 RTL10Q7L3V2 364 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 OTOP3Q7RTS5 596 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 POMGNT1Q8WZA1 660 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 SMG7Q92540 1137 aaKnown RBP26.06■■□□□ 1.76
MRPL28-205ENST00000447696 STAMQ92783 540 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 ACSF2Q96CM8 615 aaPredicted RBP26.06■■□□□ 1.76
MRPL28-205ENST00000447696 WDR6Q9NNW5 1121 aaKnown RBP26.06■■□□□ 1.76
MRPL28-205ENST00000447696 ZDHHC9Q9Y397 364 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 CDY1Q9Y6F8 540 aa26.06■■□□□ 1.76
MRPL28-205ENST00000447696 H7C4K7 107 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 POLR2DO15514 142 aaKnown RBP26.05■■□□□ 1.76
MRPL28-205ENST00000447696 PAX3P23760 479 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 ACOT2P49753 483 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 KCNA1Q09470 495 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 SPATA1Q5VX52 437 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 SLC8B1Q6J4K2 584 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 APPL2Q8NEU8 664 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 BEST2Q8NFU1 509 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 C7orf25Q9BPX7 421 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 TMEM206Q9H813 350 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 PCDHB8Q9UN66 801 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 C2CD2Q9Y426 696 aa26.05■■□□□ 1.76
MRPL28-205ENST00000447696 USP34Q70CQ2 3546 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 C2orf16Q68DN1 1984 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 POU2F2P09086 479 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 GARTP22102 1010 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 AARSP49588 968 aaKnown RBP eCLIP26.04■■□□□ 1.76
MRPL28-205ENST00000447696 ASIC1P78348 528 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 MRPL58Q14197 206 aaKnown RBP26.04■■□□□ 1.76
MRPL28-205ENST00000447696 TMEM132DQ14C87 1099 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 JADE1Q6IE81 842 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 RSPO2Q6UXX9 243 aaPredicted RBP26.04■■□□□ 1.76
MRPL28-205ENST00000447696 SYCP3Q8IZU3 236 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 FAM212AQ96EL1 285 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 FGFBP2Q9BYJ0 223 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 IKZF4Q9H2S9 585 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 CLUHO75153 1309 aa26.04■■□□□ 1.76
MRPL28-205ENST00000447696 M0QZQ0 153 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 TBC1D4O60343 1298 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 C8AP07357 584 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 AVPR2P30518 371 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 KRT85P78386 507 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 UVSSAQ2YD98 709 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 PIDD1Q9HB75 910 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 ATP6V1DQ9Y5K8 247 aa26.03■■□□□ 1.76
MRPL28-205ENST00000447696 IL18RAPO95256 599 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 NFICP08651 508 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 BECN1Q14457 450 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 PPM1LQ5SGD2 360 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 ZNF280DQ6N043 979 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 CRELD2Q6UXH1 353 aaPredicted RBP26.02■■□□□ 1.76
MRPL28-205ENST00000447696 ATOH1Q92858 354 aaPredicted RBP26.02■■□□□ 1.76
MRPL28-205ENST00000447696 ASIC4Q96FT7 647 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 KCNH3Q9ULD8 1083 aa26.02■■□□□ 1.76
MRPL28-205ENST00000447696 EIF3DO15371 548 aaKnown RBP eCLIP26.01■■□□□ 1.75
MRPL28-205ENST00000447696 LDHAP00338 332 aaKnown RBP26.01■■□□□ 1.75
MRPL28-205ENST00000447696 ROR1Q01973 937 aa26.01■■□□□ 1.75
MRPL28-205ENST00000447696 NT5DC4Q86YG4 428 aa26.01■■□□□ 1.75
MRPL28-205ENST00000447696 ZNF461Q8TAF7 563 aa26.01■■□□□ 1.75
MRPL28-205ENST00000447696 LEO1Q8WVC0 666 aaPredicted RBP26.01■■□□□ 1.75
MRPL28-205ENST00000447696 SPATA32Q96LK8 384 aa26.01■■□□□ 1.75
MRPL28-205ENST00000447696 SORCS3Q9UPU3 1222 aa26.01■■□□□ 1.75
MRPL28-205ENST00000447696 KIAA0391O15091 583 aaKnown RBP26■■□□□ 1.75
MRPL28-205ENST00000447696 XYLBO75191 536 aa26■■□□□ 1.75
MRPL28-205ENST00000447696 PRPF6O94906 941 aaKnown RBP26■■□□□ 1.75
MRPL28-205ENST00000447696 GUCY2FP51841 1108 aa26■■□□□ 1.75
MRPL28-205ENST00000447696 CTXN3Q4LDR2 81 aa26■■□□□ 1.75
MRPL28-205ENST00000447696 UNC13DQ70J99 1090 aa26■■□□□ 1.75
MRPL28-205ENST00000447696 SLC7A14Q8TBB6 771 aa26■■□□□ 1.75
MRPL28-205ENST00000447696 OXCT2Q9BYC2 517 aaPredicted RBP26■■□□□ 1.75
MRPL28-205ENST00000447696 FBXL5Q9UKA1 691 aa26■■□□□ 1.75
MRPL28-205ENST00000447696 ABLIM3O94929 683 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms