RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 MOCS2O96007 188 aaPredicted RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 ELAVL2Q12926 359 aaKnown RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 ANKRD40Q6AI12 368 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 ZNF438Q7Z4V0 828 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 NR1H4Q96RI1 486 aaPredicted RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 MXRA8Q9BRK3 442 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 PTPRUQ92729 1446 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 SOWAHDA6NJG2 315 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 ANXA11P50995 505 aaKnown RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 PDCLQ13371 301 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 PDK1Q15118 436 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 RABGAP1LQ5R372 815 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 TRIM68Q6AZZ1 485 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 SMAPO00193 183 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 CHUKO15111 745 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 CDH18Q13634 790 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 NAF1Q96HR8 494 aaKnown RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 C1QTNF7Q9BXJ2 289 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 HADHAP40939 763 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 ZBTB17Q13105 803 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
FN1-212ENST00000446046 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 STAG2Q8N3U4 1231 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 GPRASP2Q96D09 838 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 HPDLQ96IR7 371 aa12.32□□□□□ -0.44
FN1-212ENST00000446046 SLIT1O75093 1534 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 A0A1W2PQC6 194 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CAMTA2O94983 1202 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CTSHP09668 335 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 EPHB3P54753 998 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 ZNF500O60304 480 aaPredicted RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 RHOBTB3O94955 611 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 EIF3EP60228 445 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 GPR63Q9BZJ6 419 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 ING2Q9H160 280 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 TMEM8AQ9HCN3 771 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 UVRAGQ9P2Y5 699 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 C3P01024 1663 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 NMT2O60551 498 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CYP2C8P10632 490 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 GNL1P36915 607 aaPredicted RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 ACTR2P61160 394 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 HPCAP84074 193 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 SNRNP35Q16560 246 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 TADA1Q96BN2 335 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CTIFO43310 598 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 SYNCRIPO60506 623 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 HSPA1AP0DMV8 641 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 HSPA1BP0DMV9 641 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 BACE1P56817 501 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
FN1-212ENST00000446046 SEPT8Q92599 483 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.442e-44■■■■□ 22.2
FN1-212ENST00000446046 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CASS4Q9NQ75 786 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CROCCQ5TZA2 2017 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 KCNN4O15554 427 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 TSGA10IPQ3SY00 556 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 C5orf58C9J3I9 102 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
FN1-212ENST00000446046 P4HA2O15460 535 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 FASTKD1Q53R41 847 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 IRAK1BP1Q5VVH5 260 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 PID1Q7Z2X4 250 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 DNERQ8NFT8 737 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 TAF6P49848 677 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 PRUNE1Q86TP1 453 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 PITPNM3Q9BZ71 974 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 XAB2Q9HCS7 855 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 KIAA1257Q9ULG3 409 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 STRNO43815 780 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 RAG1P15918 1043 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 TRIP13Q15645 432 aaPredicted RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 ARHGEF26Q96DR7 871 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 AFF4Q9UHB7 1163 aaKnown RBP12.3□□□□□ -0.44
FN1-212ENST00000446046 PCSK1NQ9UHG2 260 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 NR3C2P08235 984 aa12.3□□□□□ -0.44
FN1-212ENST00000446046 PTK6Q13882 451 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms