RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GPRC5CQ9NQ84 441 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 BATF3Q9NR55 127 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 NOD1Q9Y239 953 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 ROBO3Q96MS0 1386 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 PRKCBP05771 671 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 MARSP56192 900 aaKnown RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 RPS6KA2Q15349 733 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 CASP5P51878 434 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 HYIQ5T013 277 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 NUDCD3Q8IVD9 361 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 SIX6OS1Q8N1H7 587 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 RNF149Q8NC42 400 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 KIFC3Q9BVG8 833 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 TTYH3Q9C0H2 523 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 ELF1P32519 619 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 NPTX2P47972 431 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 HMGCS2P54868 508 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 C4orf19Q8IY42 314 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 PGM2Q96G03 612 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 NCF2P19878 526 aaPredicted RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 RFC5P40937 340 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 KPNA2P52292 529 aaKnown RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 COPS2P61201 443 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 SLC20A2Q08357 652 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 WDR72Q3MJ13 1102 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 PURBQ96QR8 312 aaKnown RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 FAM118BQ9BPY3 351 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 GCOM2Q9BZD3 368 aaPredicted RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 TMEM39BQ9GZU3 492 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 KCNQ5Q9NR82 932 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 EML1O00423 815 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 LCA5LO95447 670 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 RXRBP28702 533 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 CAP2P40123 477 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 APOBEC3HQ6NTF7 200 aaKnown RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 ZC3H18Q86VM9 953 aaKnown RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 ATG4AQ8WYN0 398 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 PPP1R16BQ96T49 567 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 KCTD10Q9H3F6 313 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 CCDC22O60826 627 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 CUL2Q13617 745 aa17.55■□□□□ 0.4
TCOF1-206ENST00000445265 MXD4Q14582 209 aaPredicted RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
TCOF1-206ENST00000445265 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 MMEL1Q495T6 779 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 DPP9Q86TI2 863 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 SLC47A2Q86VL8 602 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 TAS1R2Q8TE23 839 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 SERPINI1Q99574 410 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 NOD2Q9HC29 1040 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 ZNF263O14978 683 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
TCOF1-206ENST00000445265 RBBP5Q15291 538 aaKnown RBP17.54■□□□□ 0.4
TCOF1-206ENST00000445265 HSP90AA5PQ58FG0 334 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 AP1ARQ63HQ0 302 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
TCOF1-206ENST00000445265 MIPOL1Q8TD10 442 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 ARHGEF26Q96DR7 871 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 NIF3L1Q9GZT8 377 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 WWP1Q9H0M0 922 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 SMYD2Q9NRG4 433 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 ABCC6O95255 1503 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 IGF2BP3O00425 579 aaKnown RBP eCLIP17.54■□□□□ 0.4
TCOF1-206ENST00000445265 ASAP2O43150 1006 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 SPAG6O75602 509 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 GHRP10912 638 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 ZFXP17010 805 aaPredicted RBP17.54■□□□□ 0.4
TCOF1-206ENST00000445265 HEATR6Q6AI08 1181 aaKnown RBP17.54■□□□□ 0.4
TCOF1-206ENST00000445265 UBN1Q9NPG3 1134 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 EPS15L1Q9UBC2 864 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 TTC4O95801 387 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 SH2D4BQ5SQS7 431 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 CEP120Q8N960 986 aa17.54■□□□□ 0.4
TCOF1-206ENST00000445265 TRAPPC3O43617 180 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 DIAPH2O60879 1101 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 MX2P20592 715 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 RRM1P23921 792 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 RARRES1P49788 294 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 C1orf186Q6ZWK4 172 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 TSSK1BQ9BXA7 367 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 TOPORSQ9NS56 1045 aaPredicted RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 IPO11Q9UI26 975 aaKnown RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 NUB1Q9Y5A7 615 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 C19orf81C9J6K1 198 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 O00370 1275 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 PROSCO94903 275 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 VIL1P09327 827 aaKnown RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 FAM47CQ5HY64 1035 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 YTHDF3Q7Z739 585 aaKnown RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 PACS2Q86VP3 889 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 TARS2Q9BW92 718 aaKnown RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 GOLGA8RI6L899 631 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms