RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 BEST2Q8NFU1 509 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 RPGRIP1Q96KN7 1286 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 SUSD3Q96L08 255 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 POMKQ9H5K3 350 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 ASB7Q9H672 318 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 PDE11AQ9HCR9 933 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 AGPAT3Q9NRZ7 376 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 DZANK1Q9NVP4 752 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 MTRRQ9UBK8 725 aa14.68□□□□□ -0.06
GARNL3-208ENST00000444677 TDRD15B5MCY1 1934 aaKnown RBP14.68□□□□□ -0.06
GARNL3-208ENST00000444677 MYH15Q9Y2K3 1946 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 TRAPPC3O43617 180 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 LDHAP00338 332 aaKnown RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 DPYDQ12882 1025 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 CBX2Q14781 532 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 VARS2Q5ST30 1063 aaKnown RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 C9orf57Q5W0N0 161 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 FMR1NBQ8N0W7 255 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 GPD1LQ8N335 351 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 RDH13Q8NBN7 331 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 KREMEN2Q8NCW0 462 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 ENGASEQ8NFI3 743 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 PHF7Q9BWX1 381 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 EXOC1Q9NV70 894 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 RBAKQ9NYW8 714 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-208ENST00000444677 HSPBP1Q9NZL4 362 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 PRKAG3Q9UGI9 489 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 DERAQ9Y315 318 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 CDY1Q9Y6F8 540 aa14.67□□□□□ -0.06
GARNL3-208ENST00000444677 ANO9A1A5B4 782 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 PIRO00625 290 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 TBC1D4O60343 1298 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 CYP2J2P51589 502 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 ARPP19P56211 112 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 ITIH3Q06033 890 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
GARNL3-208ENST00000444677 MRPL58Q14197 206 aaKnown RBP14.66□□□□□ -0.06
GARNL3-208ENST00000444677 BMT2Q1RMZ1 405 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 GPR149Q86SP6 731 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
GARNL3-208ENST00000444677 ZNF707Q96C28 371 aaPredicted RBP14.66□□□□□ -0.06
GARNL3-208ENST00000444677 TSPAN18Q96SJ8 248 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 EPHX3Q9H6B9 360 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 SFXN1Q9H9B4 322 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 DPP3Q9NY33 737 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
GARNL3-208ENST00000444677 PCDHB8Q9UN66 801 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 C2CD2Q9Y426 696 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 BACE2Q9Y5Z0 518 aa14.66□□□□□ -0.06
GARNL3-208ENST00000444677 C5orf42Q9H799 3197 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 CCDC195A0A1B0GUA6 201 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 GOLGA6L4A6NEF3 574 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 LOC730098B7Z3J9 87 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 M0QZQ0 153 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 SYN3O14994 580 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 XPOTO43592 962 aaKnown RBP14.65□□□□□ -0.06
GARNL3-208ENST00000444677 IL18RAPO95256 599 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 AARSP49588 968 aaKnown RBP eCLIP14.65□□□□□ -0.06
GARNL3-208ENST00000444677 LILRA4P59901 499 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 TFAMQ00059 246 aaKnown RBP14.65□□□□□ -0.06
GARNL3-208ENST00000444677 POU5F1Q01860 360 aaKnown RBP14.65□□□□□ -0.06
GARNL3-208ENST00000444677 CREMQ03060 361 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 PNOCQ13519 176 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 RAB33AQ14088 237 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 KNOP1Q1ED39 458 aaKnown RBP14.65□□□□□ -0.06
GARNL3-208ENST00000444677 ATAT1Q5SQI0 421 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 DSTYKQ6XUX3 929 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 ANKS3Q6ZW76 656 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 BORCS6Q96GS4 357 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 SENP8Q96LD8 212 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 FBXL5Q9UKA1 691 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 FBXW11Q9UKB1 542 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 PTPRJQ12913 1337 aa14.65□□□□□ -0.06
GARNL3-208ENST00000444677 ZNF233A6NK53 670 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 MTHFRP42898 656 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 ROR1Q01973 937 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 PSMD2Q13200 908 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 CTXN3Q4LDR2 81 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 PDXDC1Q6P996 788 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 C1orf127Q8N9H9 656 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 OR5B17Q8NGF7 314 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 CXorf38Q8TB03 319 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 RIPOR3Q96MK2 946 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 POP1Q99575 1024 aaKnown RBP14.64□□□□□ -0.07
GARNL3-208ENST00000444677 PLEKHA4Q9H4M7 779 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 MAPK8IP1Q9UQF2 711 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 BDP1A6H8Y1 2624 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 UBE4BO95155 1302 aa14.64□□□□□ -0.07
GARNL3-208ENST00000444677 WDR27A2RRH5 827 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 C2CD4DB7Z1M9 353 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 ZMYND10O75800 440 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 RHOBTB3O94955 611 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 MYL1P05976 194 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 OR4Q2P0C623 313 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 COL9A1P20849 921 aa14.63□□□□□ -0.07
GARNL3-208ENST00000444677 POLR2BP30876 1174 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms