RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ABCB5Q2M3G0 1257 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 INAVAQ3KP66 663 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 MORC4Q8TE76 937 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 NACC2Q96BF6 587 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 RSAD1Q9HA92 442 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 KCNE5Q9UJ90 142 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 TRHDEQ9UKU6 1024 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 KATNA1O75449 491 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 MTHFD1P11586 935 aaKnown RBP6.02□□□□□ -1.45
VPS50-206ENST00000443443 C5AR1P21730 350 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 WASP42768 502 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 ANAPC15P60006 121 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 KIF23Q02241 960 aaPredicted RBP6.02□□□□□ -1.45
VPS50-206ENST00000443443 CYP2A13Q16696 494 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 PTPROQ16827 1216 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 DACT2Q5SW24 774 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 PNMA8AQ86V59 439 aaPredicted RBP6.02□□□□□ -1.45
VPS50-206ENST00000443443 ADGRG3Q86Y34 549 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 COLGALT2Q8IYK4 626 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 CBARPQ8N350 705 aaPredicted RBP6.02□□□□□ -1.45
VPS50-206ENST00000443443 CAGE1Q8TC20 777 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 TMEM74BQ9NUR3 256 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 PTGFRNQ9P2B2 879 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 TUBD1Q9UJT1 453 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 DMTF1Q9Y222 760 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 INSL6Q9Y581 213 aa6.02□□□□□ -1.45
VPS50-206ENST00000443443 MAST3O60307 1309 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 GRM6O15303 877 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 AGFG2O95081 481 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 CCND1P24385 295 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 EVA1CP58658 441 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 CDC42EP1Q00587 391 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 SCAPQ12770 1279 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 TARDBPQ13148 414 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-206ENST00000443443 MTMR1Q13613 665 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 IL10RAQ13651 578 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 PCBP2Q15366 365 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-206ENST00000443443 HSP90AB4PQ58FF6 505 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 UTP14CQ5TAP6 766 aaKnown RBP6.01□□□□□ -1.45
VPS50-206ENST00000443443 Q6ZNX1 250 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 GADL1Q6ZQY3 521 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 AIFM2Q9BRQ8 373 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 UNKLQ9H9P5 680 aaKnown RBP6.01□□□□□ -1.45
VPS50-206ENST00000443443 KIAA1586Q9HCI6 787 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 LRIT1Q9P2V4 623 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 HSFX1Q9UBD0 423 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 LIMCH1Q9UPQ0 1083 aa6.01□□□□□ -1.45
VPS50-206ENST00000443443 SALL3Q9BXA9 1300 aa6□□□□□ -1.45
VPS50-206ENST00000443443 SHTN1A0MZ66 631 aa6□□□□□ -1.45
VPS50-206ENST00000443443 MYADML2A6NDP7 307 aa6□□□□□ -1.45
VPS50-206ENST00000443443 CCDC154A6NI56 674 aa6□□□□□ -1.45
VPS50-206ENST00000443443 PCDHGA12O60330 932 aa6□□□□□ -1.45
VPS50-206ENST00000443443 HAUS5O94927 633 aa6□□□□□ -1.45
VPS50-206ENST00000443443 SBK3P0C264 359 aa6□□□□□ -1.45
VPS50-206ENST00000443443 FCER1AP12319 257 aa6□□□□□ -1.45
VPS50-206ENST00000443443 PTH2RP49190 550 aa6□□□□□ -1.45
VPS50-206ENST00000443443 CLK3P49761 638 aaKnown RBP6□□□□□ -1.45
VPS50-206ENST00000443443 CDKN1CP49918 316 aaPredicted RBP6□□□□□ -1.45
VPS50-206ENST00000443443 VAV2P52735 878 aa6□□□□□ -1.45
VPS50-206ENST00000443443 SETQ01105 290 aaPredicted RBP6□□□□□ -1.45
VPS50-206ENST00000443443 ZCRB1Q8TBF4 217 aaKnown RBP6□□□□□ -1.45
VPS50-206ENST00000443443 SLC9A6Q92581 669 aa6□□□□□ -1.45
VPS50-206ENST00000443443 CLPTM1LQ96KA5 538 aa6□□□□□ -1.45
VPS50-206ENST00000443443 MED15Q96RN5 788 aa6□□□□□ -1.45
VPS50-206ENST00000443443 SLC52A1Q9NWF4 448 aa6□□□□□ -1.45
VPS50-206ENST00000443443 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
VPS50-206ENST00000443443 PCDHGA9Q9Y5G4 932 aaKnown RBP6□□□□□ -1.45
VPS50-206ENST00000443443 PCDHGA8Q9Y5G5 932 aa6□□□□□ -1.45
VPS50-206ENST00000443443 PCDHGA7Q9Y5G6 932 aa6□□□□□ -1.45
VPS50-206ENST00000443443 PCDHGA6Q9Y5G7 932 aa6□□□□□ -1.45
VPS50-206ENST00000443443 PCDHGA3Q9Y5H0 932 aa6□□□□□ -1.45
VPS50-206ENST00000443443 TRGV11A0A075B6L2 103 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 HTRA2O43464 458 aaPredicted RBP5.99□□□□□ -1.45
VPS50-206ENST00000443443 ZNF280AP59817 542 aaPredicted RBP5.99□□□□□ -1.45
VPS50-206ENST00000443443 MRPS35P82673 323 aaKnown RBP5.99□□□□□ -1.45
VPS50-206ENST00000443443 GEN1Q17RS7 908 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 UAP1L1Q3KQV9 507 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 PABPC1LQ4VXU2 614 aaKnown RBP5.99□□□□□ -1.45
VPS50-206ENST00000443443 PRR16Q569H4 304 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 HSP90AB2PQ58FF8 381 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 EFCAB2Q5VUJ9 269 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 PPP4R3AQ6IN85 833 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 FBXO42Q6P3S6 717 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 RD3Q7Z3Z2 195 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 DCBLD1Q8N8Z6 715 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 SIMC1Q8NDZ2 872 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 GPATCH3Q96I76 525 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 TEKT5Q96M29 485 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 PACSIN1Q9BY11 444 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 TLK1Q9UKI8 766 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 CDYLQ9Y232 598 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 SPATA31A6Q5VVP1 1343 aa5.99□□□□□ -1.45
VPS50-206ENST00000443443 RPLP2P05387 115 aaKnown RBP5.98□□□□□ -1.45
VPS50-206ENST00000443443 TYRP1P17643 537 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 SLC6A4P31645 630 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 AMPD3Q01432 767 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 FPGSQ05932 587 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 SLFN5Q08AF3 891 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 PTPN21Q16825 1174 aa5.98□□□□□ -1.45
VPS50-206ENST00000443443 C3orf36Q3SXR2 165 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms