RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 FAM208BQ5VWN6 2430 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 CHURC1-FNTBB4DL54 471 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 TM4SF5O14894 197 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 NEMFO60524 1076 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 CCNE1P24864 410 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 HOXA6P31267 233 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 FNTBP49356 437 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 EFNA5P52803 228 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 SRSF5Q13243 272 aaKnown RBP15.82■□□□□ 0.12
HMGN1-208ENST00000443046 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 LONP2Q86WA8 852 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 HS6ST3Q8IZP7 471 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 DEPTORQ8TB45 409 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 DDX1Q92499 740 aaKnown RBP15.82■□□□□ 0.12
HMGN1-208ENST00000443046 MSANTD3Q96H12 275 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 TMEM60Q9H2L4 133 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 CYP4F11Q9HBI6 524 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 PDRG1Q9NUG6 133 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 TNFSF13BQ9Y275 285 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 BAHCC1Q9P281 2608 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 SDK1Q7Z5N4 2213 aa15.82■□□□□ 0.12
HMGN1-208ENST00000443046 H7C4K7 107 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 PODXLO00592 558 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 ZNF263O14978 683 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 KCNE1P15382 129 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 PMLP29590 882 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 GRM5P41594 1212 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 LIMK1P53667 647 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 FCHO2Q0JRZ9 810 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 ATF7IP2Q5U623 682 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 C1orf228Q6PIY5 440 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 LEMD2Q8NC56 503 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 ZSCAN18Q8TBC5 510 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-208ENST00000443046 WASF1Q92558 559 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 RSPRY1Q96DX4 576 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 ZMAT2Q96NC0 199 aaKnown RBP15.81■□□□□ 0.12
HMGN1-208ENST00000443046 KIFC3Q9BVG8 833 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 PTPRHQ9HD43 1115 aa15.81■□□□□ 0.12
HMGN1-208ENST00000443046 ORC3Q9UBD5 711 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-208ENST00000443046 SPAG17Q6Q759 2223 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 HEPACAM2A8MVW5 462 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 BTBD18B2RXH4 712 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 LIG1P18858 919 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 RPA1P27694 616 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 SHC2P98077 582 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 PPP2R5AQ15172 486 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 IQCEQ6IPM2 695 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 CEP120Q8N960 986 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 BEST2Q8NFU1 509 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 E2F7Q96AV8 911 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 CHAMP1Q96JM3 812 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 ZNF512Q96ME7 567 aaPredicted RBP15.8■□□□□ 0.12
HMGN1-208ENST00000443046 LRRC3Q9BY71 257 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 GPR88Q9GZN0 384 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 SLC38A7Q9NVC3 462 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 C2orf42Q9NWW7 574 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 AFF4Q9UHB7 1163 aaKnown RBP15.8■□□□□ 0.12
HMGN1-208ENST00000443046 ATRXP46100 2492 aa15.8■□□□□ 0.12
HMGN1-208ENST00000443046 CITO14578 2027 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 MYBPHLA2RUH7 354 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 CHADO15335 359 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 MEFVO15553 781 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 GJA1P17302 382 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 RPL9P32969 192 aaKnown RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 ARPP19P56211 112 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 TWF1Q12792 350 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 LRRC32Q14392 662 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 ELMOD1Q8N336 334 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 FAM160A2Q8N612 972 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 SHKBP1Q8TBC3 707 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 SUSD3Q96L08 255 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 CDT1Q9H211 546 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 C8orf33Q9H7E9 229 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 TOPORSQ9NS56 1045 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 RBM12Q9NTZ6 932 aaKnown RBP15.79■□□□□ 0.12
HMGN1-208ENST00000443046 ANGPTL2Q9UKU9 493 aa15.79■□□□□ 0.12
HMGN1-208ENST00000443046 DMXL2Q8TDJ6 3036 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 ABLIM1O14639 778 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 VNN2O95498 520 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 MYL4P12829 197 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 HOXC13P31276 330 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
HMGN1-208ENST00000443046 TEAD2Q15562 447 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 DGKKQ5KSL6 1271 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 N4BP2L1Q5TBK1 243 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-208ENST00000443046 TXNDC11Q6PKC3 985 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 RNF19BQ6ZMZ0 732 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 Q6ZS52 159 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 APBB1IPQ7Z5R6 666 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-208ENST00000443046 WDR5BQ86VZ2 330 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 ACO2Q99798 780 aaKnown RBP15.78■□□□□ 0.12
HMGN1-208ENST00000443046 POLD4Q9HCU8 107 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 ASAH2Q9NR71 780 aa15.78■□□□□ 0.12
HMGN1-208ENST00000443046 CNTN3Q9P232 1028 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms