RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 CHAMP1Q96JM3 812 aa13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 PHF7Q9BWX1 381 aaPredicted RBP13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 FGFBP2Q9BYJ0 223 aa13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 BDP1A6H8Y1 2624 aa13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 TSC2P49815 1807 aa13.61□□□□□ -0.23
CDCA4P3-201ENST00000442572 M0QZQ0 153 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 KLRC4O43908 158 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 ZNF202O95125 648 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 KIF20AO95235 890 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 MCM4P33991 863 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 HOXD13P35453 343 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 BRCC3P46736 316 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 RAB33AQ14088 237 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 PRSS55Q6UWB4 352 aaPredicted RBP13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 C12orf56Q8IXR9 622 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 GJD3Q8N144 294 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 CACTINQ8WUQ7 758 aaKnown RBP13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 TMEM174Q8WUU8 243 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 B3GALT6Q96L58 329 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 CLSTN3Q9BQT9 956 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 CBWD1Q9BRT8 395 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 MAN1C1Q9NR34 630 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 TUBGCP4Q9UGJ1 667 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 PCDHB8Q9UN66 801 aa13.6□□□□□ -0.23
CDCA4P3-201ENST00000442572 ANO9A1A5B4 782 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 TGM5O43548 720 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 HOXA9P31269 272 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 MRPL58Q14197 206 aaKnown RBP13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 KNOP1Q1ED39 458 aaKnown RBP13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 SLC8B1Q6J4K2 584 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 GPR149Q86SP6 731 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 GLIS3Q8NEA6 775 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 SCFD1Q8WVM8 642 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 HPS3Q969F9 1004 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 GDPD2Q9HCC8 539 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 RBAKQ9NYW8 714 aaPredicted RBP13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 FBXW11Q9UKB1 542 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 MAFFQ9ULX9 164 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
CDCA4P3-201ENST00000442572 LOC730098B7Z3J9 87 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 PIRO00625 290 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 TGFB1I1O43294 461 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 RHOBTB3O94955 611 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 RPN1P04843 607 aaKnown RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 NFICP08651 508 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 POU2F2P09086 479 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 HNRNPA1P09651 372 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 CASP1P29466 404 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 PNPLA4P41247 253 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 LILRA4P59901 499 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 SPAG1Q07617 926 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 DPYDQ12882 1025 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 KCNB1Q14721 858 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 RARS2Q5T160 578 aaKnown RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 C9orf57Q5W0N0 161 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 ZNF280DQ6N043 979 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 PALB2Q86YC2 1186 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 GRAMD1CQ8IYS0 662 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 FMR1NBQ8N0W7 255 aaPredicted RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 XXYLT1Q8NBI6 393 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 KREMEN2Q8NCW0 462 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 ZNF560Q96MR9 790 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 TIGD1Q96MW7 591 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 IKZF4Q9H2S9 585 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 GOLPH3LQ9H4A5 285 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 SLC39A2Q9NP94 309 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 HSPBP1Q9NZL4 362 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 DSEQ9UL01 958 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 USTQ9Y2C2 406 aa13.58□□□□□ -0.24
CDCA4P3-201ENST00000442572 VCANP13611 3396 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 I3L4J1 428 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 TBC1D4O60343 1298 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 ZMYND10O75800 440 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 OAZ2O95190 189 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 TYMPP19971 482 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 IGFBP6P24592 240 aaPredicted RBP13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 SSTR3P32745 418 aaPredicted RBP13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 OR1D2P34982 312 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 STK4Q13043 487 aa13.57□□□□□ -0.24
CDCA4P3-201ENST00000442572 MYBPC2Q14324 1141 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms