RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 WBP1LQ9NX94 342 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 PIN4Q9Y237 131 aaKnown RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 PTPN22Q9Y2R2 807 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 CDY2AQ9Y6F7 541 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 KAT6AQ92794 2004 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 FOXN3O00409 490 aaPredicted RBP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 EVI5O60447 810 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 NPTXRO95502 500 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 TNNC2P02585 160 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 TUBB4AP04350 444 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 ELF1P32519 619 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 RWDD2BP57060 319 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 GCNT1Q02742 428 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 NCOA4Q13772 614 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 CRYMQ14894 314 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 KIAA1328Q86T90 577 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 VPS36Q86VN1 386 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 HELQQ8TDG4 1101 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 ANKRD36BP1Q96IX9 119 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 PI4K2AQ9BTU6 479 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 REXO2Q9Y3B8 237 aaKnown RBP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 SCN10AQ9Y5Y9 1956 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 LACTBL1A8MY62 500 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 TMCO5BA8MYB1 307 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 VNN1O95497 513 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 CTSHP09668 335 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 ANXA13P27216 316 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 MAGEA8P43361 318 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 CYP27A1Q02318 531 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 PTK2Q05397 1052 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 RINLQ6ZS11 566 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 KAT5Q92993 513 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 GPR88Q9GZN0 384 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 LZTFL1Q9NQ48 299 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 ADAM21Q9UKJ8 722 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 MROH7Q68CQ1 1323 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 PCNTO95613 3336 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 KBTBD13C9JR72 458 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 LCA5LO95447 670 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 THPOP40225 353 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 PTK7Q13308 1070 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 TRPC3Q13507 836 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 SLC10A6Q3KNW5 377 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 LEKR1Q6ZMV7 388 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 CD302Q8IX05 232 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 SHC3Q92529 594 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 WNT8BQ93098 351 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 IFIH1Q9BYX4 1025 aaKnown RBP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 STARD7Q9NQZ5 370 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
CCDC39-201ENST00000442201 NOC2LQ9Y3T9 749 aaKnown RBP8.67□□□□□ -1.02
CCDC39-201ENST00000442201 CAND2O75155 1236 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 YARSP54577 528 aaKnown RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 ETF1P62495 437 aaKnown RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 GFPT1Q06210 699 aaPredicted RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 SLC18A3Q16572 532 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 ZNF571Q7Z3V5 609 aaPredicted RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 FAM228AQ86W67 206 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 EIF2AQ9BY44 585 aaKnown RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 SENP6Q9GZR1 1112 aaPredicted RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 A0A1W2PQ45 241 aaPredicted RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 A0A1W2PQY0 241 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 ZNF263O14978 683 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 POLR3GO15318 223 aaPredicted RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 NFICP08651 508 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 MAGEA1P43355 309 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 VAV2P52735 878 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 NOP14P78316 857 aaKnown RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 SGSM1Q2NKQ1 1148 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 JADE1Q6IE81 842 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 NT5DC4Q86YG4 428 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 FAM71AQ8IYT1 594 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 PLEKHA5Q9HAU0 1116 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 TRMT13Q9NUP7 481 aaKnown RBP8.66□□□□□ -1.02
CCDC39-201ENST00000442201 PCDHA13Q9Y5I0 950 aa8.66□□□□□ -1.02
CCDC39-201ENST00000442201 A0A087X0T9 212 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 RBAK-RBAKDNI3L0D1 243 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 KRT86O43790 486 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 KIF5CO60282 957 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 ASS1P00966 412 aaKnown RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 CST3P01034 146 aaPredicted RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 CHRNA1P02708 482 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 FAM228BP0C875 321 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 MYBL2P10244 700 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 TBXAS1P24557 533 aaPredicted RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 HNRNPH1P31943 449 aaKnown RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 KIF5AQ12840 1032 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 NFX1Q12986 1120 aaKnown RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 TMEM132DQ14C87 1099 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 TWF2Q6IBS0 349 aaKnown RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 SPOPLQ6IQ16 392 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 ZNF662Q6ZS27 426 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms