RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 KIF12Q96FN5 646 aa18.31■□□□□ 0.52
COL16A1-204ENST00000440437 IRF2BPLQ9H1B7 796 aa18.31■□□□□ 0.52
COL16A1-204ENST00000440437 ST6GALNAC4Q9H4F1 302 aa18.31■□□□□ 0.52
COL16A1-204ENST00000440437 UBQLN1Q9UMX0 589 aaKnown RBP18.31■□□□□ 0.52
COL16A1-204ENST00000440437 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
COL16A1-204ENST00000440437 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-204ENST00000440437 TCHHQ07283 1943 aa18.31■□□□□ 0.52
COL16A1-204ENST00000440437 MIA3Q5JRA6 1907 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 A0A0B4J269 797 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 LACTBL1A8MY62 500 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 M0QZQ0 153 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 PI15O43692 258 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 ABCD1P33897 745 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
COL16A1-204ENST00000440437 PABPC1LQ4VXU2 614 aaKnown RBP18.3■□□□□ 0.52
COL16A1-204ENST00000440437 ZNF280DQ6N043 979 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 PARM1Q6UWI2 310 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 ST13P5Q8NFI4 369 aaPredicted RBP18.3■□□□□ 0.52
COL16A1-204ENST00000440437 GPR152Q8TDT2 470 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 RPP25Q9BUL9 199 aaKnown RBP18.3■□□□□ 0.52
COL16A1-204ENST00000440437 ZHX3Q9H4I2 956 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 SLC2A4RGQ9NR83 387 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 STK17AQ9UEE5 414 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
COL16A1-204ENST00000440437 KCNH3Q9ULD8 1083 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 PCDHB8Q9UN66 801 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 MORC2Q9Y6X9 1032 aaPredicted RBP18.3■□□□□ 0.52
COL16A1-204ENST00000440437 USP34Q70CQ2 3546 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 SCN1AP35498 2009 aa18.3■□□□□ 0.52
COL16A1-204ENST00000440437 COL4A3Q01955 1670 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 ARPP19P56211 112 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 CTXN3Q4LDR2 81 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 ZC2HC1CQ53FD0 456 aaPredicted RBP18.29■□□□□ 0.52
COL16A1-204ENST00000440437 TPGS2Q68CL5 300 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 TCEAL8Q8IYN2 117 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 APPL2Q8NEU8 664 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 CLIC6Q96NY7 704 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 TSPAN18Q96SJ8 248 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 RTP3Q9BQQ7 232 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 RPF1Q9H9Y2 349 aaKnown RBP18.29■□□□□ 0.52
COL16A1-204ENST00000440437 AVENQ9NQS1 362 aaPredicted RBP18.29■□□□□ 0.52
COL16A1-204ENST00000440437 CA14Q9ULX7 337 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 MTMR6Q9Y217 621 aa18.29■□□□□ 0.52
COL16A1-204ENST00000440437 ANKRD63C9JTQ0 380 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 K7ELQ4 463 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-204ENST00000440437 XPOTO43592 962 aaKnown RBP18.28■□□□□ 0.52
COL16A1-204ENST00000440437 PPP1R37O75864 691 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 SEC24AO95486 1093 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 LRG1P02750 347 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 RHOP08100 348 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 ELF1P32519 619 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 GUCY2FP51841 1108 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 SLC5A9Q2M3M2 681 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 MTSS1LQ765P7 747 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 CCDC105Q8IYK2 499 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 KRI1Q8N9T8 703 aaKnown RBP18.28■□□□□ 0.52
COL16A1-204ENST00000440437 ATOH1Q92858 354 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-204ENST00000440437 USP28Q96RU2 1077 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 MSTO1Q9BUK6 570 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 INSL5Q9Y5Q6 135 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
COL16A1-204ENST00000440437 COL4A2P08572 1712 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 TISP43B9A030 160 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 PRRG1O14668 218 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 PPEF2O14830 753 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 CEBPZQ03701 1054 aaKnown RBP18.27■□□□□ 0.52
COL16A1-204ENST00000440437 PRSS36Q5K4E3 855 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 SPATA1Q5VX52 437 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 JADE1Q6IE81 842 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 POTEHQ6S545 545 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 DYMQ7RTS9 669 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 CD302Q8IX05 232 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 ING5Q8WYH8 240 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 HVCN1Q96D96 273 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 DNAJC19Q96DA6 116 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 STRA6Q9BX79 667 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 TBC1D17Q9HA65 648 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 CYP4F11Q9HBI6 524 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 ARHGEF3Q9NR81 526 aa18.27■□□□□ 0.52
COL16A1-204ENST00000440437 AFF4Q9UHB7 1163 aaKnown RBP18.27■□□□□ 0.52
COL16A1-204ENST00000440437 MYO15AQ9UKN7 3530 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 PATJQ8NI35 1801 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 MYMKA6NI61 221 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 OAZ2O95190 189 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 NFICP08651 508 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 PTPN2P17706 415 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 YWHAHQ04917 246 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-204ENST00000440437 SLC39A14Q15043 492 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 RRAGBQ5VZM2 374 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 PHLDB3Q6NSJ2 640 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 ZNF720Q7Z2F6 126 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 BEST2Q8NFU1 509 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 IKZF4Q9H2S9 585 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 SEL1LQ9UBV2 794 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 MAFFQ9ULX9 164 aa18.26■□□□□ 0.51
COL16A1-204ENST00000440437 MRPS23Q9Y3D9 190 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms