RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 GPC5P78333 572 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 NME3Q13232 169 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 RNF135Q8IUD6 432 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 PYROXD1Q8WU10 500 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 RFFLQ8WZ73 363 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 UQCC2Q9BRT2 126 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 ECT2Q9H8V3 914 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 RAVER2Q9HCJ3 691 aaKnown RBP12.19□□□□□ -0.46
CCBE1-202ENST00000439986 GGT7Q9UJ14 662 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 CAPN6Q9Y6Q1 641 aa12.19□□□□□ -0.46
CCBE1-202ENST00000439986 WDR48Q8TAF3 677 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 TRIM51Q9BSJ1 452 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 SAYSD1Q9NPB0 183 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 SALL1Q9NSC2 1324 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 DCTN3O75935 186 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 CELF1Q92879 486 aaKnown RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 OTULINQ96BN8 352 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 SEC16BQ96JE7 1060 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 ROGDIQ9GZN7 287 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 KLRC1P26715 233 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 GRSF1Q12849 480 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 SPARCL1Q14515 664 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 CCDC137Q6PK04 289 aaKnown RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 RASSF3Q86WH2 238 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 FSD1LQ9BXM9 530 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 NEMP1O14524 444 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 OCA2Q04671 838 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 EFR3AQ14156 821 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 NTRK3Q16288 839 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 ERICH1Q86X53 443 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 AGR3Q8TD06 166 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 CNTNAP5Q8WYK1 1306 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 MYMKA6NI61 221 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 ZBTB5O15062 677 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 HERVK_113P62684 666 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 KCTD21Q4G0X4 260 aa12.18□□□□□ -0.46
CCBE1-202ENST00000439986 TGS1Q96RS0 853 aaKnown RBP12.18□□□□□ -0.46
CCBE1-202ENST00000439986 CFAP69A5D8W1 941 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 C21orf2O43822 256 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 CHN1P15882 459 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 FGFR4P22455 802 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 LBRQ14739 615 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 EZH2Q15910 746 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ALFQ53S48 1182 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ZNF746Q6NUN9 644 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 B4GALNT2Q8NHY0 566 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 LCMT1Q9UIC8 334 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 V9GYQ6 96 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ESRRAP11474 423 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 HLA-DPA1P20036 260 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 S100A1P23297 94 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 IMPG1Q17R60 797 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 FOXR1Q6PIV2 292 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 USP38Q8NB14 1042 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 FAM84BQ96KN1 310 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 BATF3Q9NR55 127 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ANAPC7Q9UJX3 599 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ARL13BQ3SXY8 428 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 PRMT1Q99873 361 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 CNOT8Q9UFF9 292 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 GTF2A1LQ9UNN4 478 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 DHX34Q14147 1143 aaKnown RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 C21orf62-AS1Q17RA5 79 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 SUPT20HL1Q3ZLR7 823 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 CATSPER4Q7RTX7 472 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 SLC40A1Q9NP59 571 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 KLHL8Q9P2G9 620 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 PRPF4O43172 522 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 MOCS2O96007 188 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 FTLP02792 175 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-202ENST00000439986 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 STAT3P40763 770 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 GCLMP48507 274 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 GOLPH3Q9H4A6 298 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 ZNF304Q9HCX3 659 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 NEURL4Q96JN8 1562 aa12.17□□□□□ -0.46
CCBE1-202ENST00000439986 DENND3A2RUS2 1198 aa12.16□□□□□ -0.46
CCBE1-202ENST00000439986 NAT1P18440 290 aa12.16□□□□□ -0.46
CCBE1-202ENST00000439986 ADORA2BP29275 332 aa12.16□□□□□ -0.46
CCBE1-202ENST00000439986 POU5F1BQ06416 359 aa12.16□□□□□ -0.46
CCBE1-202ENST00000439986 NAB2Q15742 525 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms