RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 HCSTQ9UBK5 93 aa8.06□□□□□ -1.12
UBR3-205ENST00000439681 AJAP1Q9UKB5 411 aaPredicted RBP8.06□□□□□ -1.12
UBR3-205ENST00000439681 NUB1Q9Y5A7 615 aa8.06□□□□□ -1.12
UBR3-205ENST00000439681 ITIH6Q6UXX5 1313 aa8.06□□□□□ -1.12
UBR3-205ENST00000439681 CASTOR2A6NHX0 329 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 SPTLC1O15269 473 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 XPOTO43592 962 aaKnown RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 STAU1O95793 577 aaKnown RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 KRT19P08727 400 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 ATXN8OSP0DMR3 200 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 ATICP31939 592 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 RPL9P32969 192 aaKnown RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 CLCNKBP51801 687 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 LRMPQ12912 555 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 TUSC3Q13454 348 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 TRPC3Q13507 836 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 SHHQ15465 462 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 UPP1Q16831 310 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 TMC6Q7Z403 805 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 ABI1Q8IZP0 508 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 LRRC52Q8N7C0 313 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 PHOSPHO2Q8TCD6 241 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 RSPH1Q8WYR4 309 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 HPDLQ96IR7 371 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 GDF15Q99988 308 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 NAA15Q9BXJ9 866 aaKnown RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 CWH43Q9H720 699 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 VRTNQ9H8Y1 702 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 DNAJB4Q9UDY4 337 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 PODXLO00592 558 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 ZC3H11AO75152 810 aaKnown RBP eCLIP8.05□□□□□ -1.12
UBR3-205ENST00000439681 GJB5O95377 273 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 UCHL3P15374 230 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 HTRA4P83105 476 aaPredicted RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 PAN2Q504Q3 1202 aaKnown RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 FIGNQ5HY92 759 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 IQCEQ6IPM2 695 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 RRAGAQ7L523 313 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 HERC6Q8IVU3 1022 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 C3orf58Q8NDZ4 430 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 NEK11Q8NG66 645 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 TAF4BQ92750 862 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 KAT5Q92993 513 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 PDLIM2Q96JY6 352 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 KREMEN1Q96MU8 473 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.05□□□□□ -1.12
UBR3-205ENST00000439681 SLC4A7Q9Y6M7 1214 aa8.05□□□□□ -1.12
UBR3-205ENST00000439681 F8W810 466 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 GYPCP04921 128 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 ATP2A2P16615 1042 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 FXR1P51114 621 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBR3-205ENST00000439681 LILRA4P59901 499 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 NOP14P78316 857 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 RNASELQ05823 741 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 ZNF699Q32M78 642 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 WDR44Q5JSH3 913 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 DCLRE1AQ6PJP8 1040 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 LIMS2Q7Z4I7 341 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 CMTR2Q8IYT2 770 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 SPC24Q8NBT2 197 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 BAP1Q92560 729 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 UROC1Q96N76 676 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 NUP58Q9BVL2 599 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 MRPL9Q9BYD2 267 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 UBE2TQ9NPD8 197 aaPredicted RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 APEX2Q9UBZ4 518 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 FBXL5Q9UKA1 691 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 DNAJC12Q9UKB3 198 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 CAPN11Q9UMQ6 739 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.04□□□□□ -1.121e-12■■■■□ 24.6
UBR3-205ENST00000439681 FHOD1Q9Y613 1164 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 A0A1W2PQJ5 194 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 NRP1O14786 923 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 ITGB1P05556 798 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 GALTP07902 379 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 ASPAP45381 313 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 SLC11A1P49279 550 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 AARSP49588 968 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBR3-205ENST00000439681 POLR2FP61218 127 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 WDR72Q3MJ13 1102 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 LRRC43Q8N309 656 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 CPLX3Q8WVH0 158 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 NT5C1BQ96P26 610 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 SLC9A7Q96T83 725 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 RAD9AQ99638 391 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 ARID3AQ99856 593 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 EDEM3Q9BZQ6 932 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 GPR88Q9GZN0 384 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 SDCBP2Q9H190 292 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 GDAP2Q9NXN4 497 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 MRPL42Q9Y6G3 142 aaKnown RBP8.04□□□□□ -1.12
UBR3-205ENST00000439681 COL4A6Q14031 1691 aa8.04□□□□□ -1.12
UBR3-205ENST00000439681 TTC3P53804 2025 aa8.03□□□□□ -1.12
UBR3-205ENST00000439681 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
UBR3-205ENST00000439681 KPNA7A9QM74 516 aa8.03□□□□□ -1.12
UBR3-205ENST00000439681 B3GAT3O94766 335 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms