RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 RESP18Q5W5W9 173 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 USP49Q70CQ1 688 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 ASCL5Q7RTU5 278 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 CCDC105Q8IYK2 499 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 SLC7A14Q8TBB6 771 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 GPT2Q8TD30 523 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 TBC1D17Q9HA65 648 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 CDH7Q9ULB5 785 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 TNFSF13BQ9Y275 285 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 NUMBLQ9Y6R0 609 aa10.06□□□□□ -0.8
AC011228.1-201ENST00000439027 ZNF292O60281 2723 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 A0A1B0GVL5 298 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PRR23AA6NEV1 266 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PP2D1A8MPX8 630 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PROB1E7EW31 1015 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 ANHXE9PGG2 379 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 TRAPPC3O43617 180 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PAPLNO95428 1278 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 FGFR3P22607 806 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 TKTP29401 623 aaKnown RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 CDC25AP30304 524 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 NBL1P41271 181 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 BRCC3P46736 316 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 NPTX2P47972 431 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 DMP1Q13316 513 aaPredicted RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 RAB33AQ14088 237 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 ANGPT1Q15389 498 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 ZNF568Q3ZCX4 644 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 EPSTI1Q96J88 318 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 UROC1Q96N76 676 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PPP1R10Q96QC0 940 aaKnown RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 ACO2Q99798 780 aaKnown RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 RUSC1Q9BVN2 902 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 MRPL4Q9BYD3 311 aaKnown RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 PANK2Q9BZ23 570 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 GOLGA2P5Q9HBQ8 144 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 TOPORSQ9NS56 1045 aaPredicted RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 FAM13BQ9NYF5 915 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 CACNA1IQ9P0X4 2223 aa10.05□□□□□ -0.8
AC011228.1-201ENST00000439027 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 SLC16A4O15374 487 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 DCNP07585 359 aaKnown RBP10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 PFKFB1P16118 471 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 ELF1P32519 619 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 UBA7P41226 1012 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 GRM5P41594 1212 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 NDUFA8P51970 172 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 ARPP19P56211 112 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 UPP1Q16831 310 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 PARM1Q6UWI2 310 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 RSPO2Q6UXX9 243 aaPredicted RBP10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 ANKS3Q6ZW76 656 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 CEP120Q8N960 986 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 IGSF22Q8N9C0 903 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 ITFG1Q8TB96 612 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 FGF13Q92913 245 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 AK8Q96MA6 479 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 PLIN2Q99541 437 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 CDT1Q9H211 546 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 ARHGEF3Q9NR81 526 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 SLC38A7Q9NVC3 462 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 HCFC1R1Q9NWW0 138 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 KCNH3Q9ULD8 1083 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 MRPS23Q9Y3D9 190 aaKnown RBP10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 F5P12259 2224 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 TRIP11Q15643 1979 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 PHLPP2Q6ZVD8 1323 aa10.04□□□□□ -0.8
AC011228.1-201ENST00000439027 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 PODXLO00592 558 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 PRRG1O14668 218 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 MAP3K7O43318 606 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 MCF2P10911 925 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 HOXA9P31269 272 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 TXLNAP40222 546 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 MATR3P43243 847 aaKnown RBP eCLIP10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 GPC5P78333 572 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 STRN3Q13033 797 aa10.03□□□□□ -0.8
AC011228.1-201ENST00000439027 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms