RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HOXA9P31269 272 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 ELF1P32519 619 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 OR1D2P34982 312 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 PEX3P56589 373 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 PFKPQ01813 784 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 STRN3Q13033 797 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 HTR4Q13639 388 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 ZRSR1Q15695 479 aaKnown RBP8.51□□□□□ -1.05
VPS50-204ENST00000438395 PABPC1LQ4VXU2 614 aaKnown RBP8.51□□□□□ -1.05
VPS50-204ENST00000438395 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
VPS50-204ENST00000438395 EEF1DP3Q658K8 133 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 LILRA6Q6PI73 481 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 DCLRE1AQ6PJP8 1040 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 ASCL5Q7RTU5 278 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 FBXO18Q8NFZ0 1043 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 GPR152Q8TDT2 470 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 CCDC113Q9H0I3 377 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 ATP13A2Q9NQ11 1180 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 KMT5AQ9NQR1 393 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 USP20Q9Y2K6 914 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 MRPS23Q9Y3D9 190 aaKnown RBP8.51□□□□□ -1.05
VPS50-204ENST00000438395 SIT1Q9Y3P8 196 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 NUMBLQ9Y6R0 609 aa8.51□□□□□ -1.05
VPS50-204ENST00000438395 CFAP54Q96N23 3096 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 ARID2Q68CP9 1835 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 ANHXE9PGG2 379 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 H7C4K7 107 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 TMEM189-UBE2V1I3L0A0 370 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 LAD1O00515 517 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 PI15O43692 258 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 LRG1P02750 347 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 NPR3P17342 541 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 FGFR3P22607 806 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 GRM5P41594 1212 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 MATR3P43243 847 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS50-204ENST00000438395 SMTNP53814 917 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 ARPP19P56211 112 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 OSTNP61366 133 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 RAB33AQ14088 237 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 PDIA5Q14554 519 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 UVSSAQ2YD98 709 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 RTL10Q7L3V2 364 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 ADSSL1Q8N142 457 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 ELMOD1Q8N336 334 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 LNX1Q8TBB1 728 aaPredicted RBP8.5□□□□□ -1.05
VPS50-204ENST00000438395 FGF13Q92913 245 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 CLSTN3Q9BQT9 956 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 SEMA4AQ9H3S1 761 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 SLC2A4RGQ9NR83 387 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 ANKFY1Q9P2R3 1169 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 MTRRQ9UBK8 725 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 KCNG1Q9UIX4 513 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 TNFSF13BQ9Y275 285 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 RBM19Q9Y4C8 960 aaKnown RBP8.5□□□□□ -1.05
VPS50-204ENST00000438395 CDY1Q9Y6F8 540 aa8.5□□□□□ -1.05
VPS50-204ENST00000438395 SMIM28A0A1B0GU29 152 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 KRBA1A5PL33 1030 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 H3BQV1 296 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 I3L4J1 428 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 PODXLO00592 558 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 HIP1RO75146 1068 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 DCNP07585 359 aaKnown RBP8.49□□□□□ -1.05
VPS50-204ENST00000438395 POU2F2P09086 479 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 MCF2P10911 925 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 TKTP29401 623 aaKnown RBP8.49□□□□□ -1.05
VPS50-204ENST00000438395 NPTX2P47972 431 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 CLCNKBP51801 687 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 NTHL1P78549 312 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 FOXK2Q01167 660 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 ST3GAL1Q11201 340 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 UBXN2BQ14CS0 331 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 NT5DC1Q5TFE4 455 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 PHLDB3Q6NSJ2 640 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 ST13P5Q8NFI4 369 aaPredicted RBP8.49□□□□□ -1.05
VPS50-204ENST00000438395 RASSF8Q8NHQ8 419 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 ING5Q8WYH8 240 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 BICD1Q96G01 975 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 ACAP3Q96P50 834 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 PPP1R10Q96QC0 940 aaKnown RBP8.49□□□□□ -1.05
VPS50-204ENST00000438395 KXD1Q9BQD3 176 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 TIPINQ9BVW5 301 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 CDT1Q9H211 546 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 C17orf75Q9HAS0 396 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 UPF2Q9HAU5 1272 aaKnown RBP8.49□□□□□ -1.05
VPS50-204ENST00000438395 GOLGA2P5Q9HBQ8 144 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 POLD4Q9HCU8 107 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 KCNH3Q9ULD8 1083 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.49□□□□□ -1.05
VPS50-204ENST00000438395 BACE2Q9Y5Z0 518 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 WASF2Q9Y6W5 498 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 DENND4AQ7Z401 1863 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 MYO10Q9HD67 2058 aa8.49□□□□□ -1.05
VPS50-204ENST00000438395 H0YCG3 227 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 SYN3O14994 580 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms