RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 C16orf62Q7Z3J2 963 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 KRT77Q7Z794 578 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 IP6K1Q92551 441 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 MSTO1Q9BUK6 570 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 TMEM120BA0PK00 339 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 ICA1Q05084 483 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 RGS21Q2M5E4 152 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 NGRNQ9NPE2 291 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 MRPL39Q9NYK5 338 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 SLCO1B7G3V0H7 640 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 GUCY1B2O75343 617 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 CCNA1P78396 465 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 CENPCQ03188 943 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 MTFR1Q15390 333 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 HEATR4Q86WZ0 1026 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 WDR60Q8WVS4 1066 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 HES6Q96HZ4 224 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 RXFP1Q9HBX9 757 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 SH2B2O14492 632 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 NR3C1P04150 777 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 ATP1A1P05023 1023 aaKnown RBP12.07□□□□□ -0.48
PTCH1-209ENST00000437951 Q4G0T1 1027 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 TRIM39Q9HCM9 518 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 TUFT1Q9NNX1 390 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 VPS9D1Q9Y2B5 631 aa12.07□□□□□ -0.48
PTCH1-209ENST00000437951 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 AP3B2Q13367 1082 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TRPC4APQ8TEL6 797 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 NMRK1Q9NWW6 199 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 PSMD14O00487 310 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TLR2O60603 784 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 BTKQ06187 659 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 PPIDQ08752 370 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TIMM50Q3ZCQ8 353 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CYP4Z2PQ8N1L4 340 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 MMGT1Q8N4V1 131 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CEP170P1Q96L14 293 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 HDHD2Q9H0R4 259 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 MFN2O95140 757 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ATP6V1G2O95670 118 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CAPZA2P47755 286 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 LRRC41Q15345 812 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 OASLQ15646 514 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CDO1Q16878 200 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TRIM51Q9BSJ1 452 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 NXF1Q9UBU9 619 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 VAV3Q9UKW4 847 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 INPP5FQ9Y2H2 1132 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 SSU72P8A0A1W2PR75 194 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CACNA2D1P54289 1103 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 RAD23AP54725 363 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TSNQ15631 228 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 PMF1Q6P1K2 205 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CYP4Z1Q86W10 505 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 XXYLT1Q8NBI6 393 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 SETD9Q8NE22 299 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 NARS2Q96I59 477 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 RBM15Q96T37 977 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ECSITQ9BQ95 431 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 AVENQ9NQS1 362 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TNRQ92752 1358 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TEX28O15482 410 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ITGAXP20702 1163 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CCDC157Q569K6 752 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 INO80BQ9C086 356 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 FKBP14Q9NWM8 211 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ALOX5P09917 674 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 ALAS1P13196 640 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 RAB25P57735 213 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 KCNH2Q12809 1159 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 USP39Q53GS9 565 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 C6orf10Q5SRN2 563 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 PACSIN1Q9BY11 444 aa12.06□□□□□ -0.48
PTCH1-209ENST00000437951 CCDC59Q9P031 241 aaKnown RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 TTC7AQ9ULT0 858 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-209ENST00000437951 SLC16A3O15427 465 aaKnown RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 IFNA14P01570 189 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 SESN2P58004 480 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ACTR2P61160 394 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 PTK7Q13308 1070 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 ARHGAP27Q6ZUM4 889 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
PTCH1-209ENST00000437951 LRRC1Q9BTT6 524 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms