RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 UMODL1Q5DID0 1318 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 ATMINO43313 823 aaPredicted RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 RAD51CO43502 376 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 ZEB2O60315 1214 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 TNNC2P02585 160 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 TMEM191BP0C7N4 346 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 MCF2P10911 925 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 COMTP21964 271 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 OAS2P29728 719 aaKnown RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 NSFP46459 744 aaKnown RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 ZNF132P52740 706 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 MRPS25P82663 173 aaKnown RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 TRPC3Q13507 836 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 MESDQ14696 234 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 AMHR2Q16671 573 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 DGKDQ16760 1214 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 KYAT1Q16773 422 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 KLHL7Q8IXQ5 586 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 OR6J1Q8NGC5 347 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 CD101Q93033 1021 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 RNPC3Q96LT9 517 aaKnown RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 NIF3L1Q9GZT8 377 aa27.47■■□□□ 1.99
CPNE1-216ENST00000437340 RPF1Q9H9Y2 349 aaKnown RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 ZHX1Q9UKY1 873 aaPredicted RBP27.47■■□□□ 1.99
CPNE1-216ENST00000437340 A0A087WZ62 844 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 FAM170AA1A519 330 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 FGGP02679 453 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 IQCF3P0C7M6 154 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 NNTQ13423 1086 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 GSPT2Q8IYD1 628 aaKnown RBP27.46■■□□□ 1.99
CPNE1-216ENST00000437340 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.46■■□□□ 1.993e-13■■■■■ 108.9
CPNE1-216ENST00000437340 ALG3Q92685 438 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 FDXACB1Q9BRP7 624 aaPredicted RBP27.46■■□□□ 1.99
CPNE1-216ENST00000437340 AP1M1Q9BXS5 423 aa27.46■■□□□ 1.99
CPNE1-216ENST00000437340 ALDH1A1P00352 501 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 MYL6P60660 151 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 GUCY2DQ02846 1103 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 PPFIA1Q13136 1202 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 CAVIN3Q969G5 261 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 VCPIP1Q96JH7 1222 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 EPB41L5Q9HCM4 733 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 ST7Q9NRC1 585 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 HPCAL4Q9UM19 191 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 EVPLQ92817 2033 aa27.45■■□□□ 1.99
CPNE1-216ENST00000437340 CCDC66A2RUB6 948 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 SART1O43290 800 aaKnown RBP27.45■■□□□ 1.98
CPNE1-216ENST00000437340 HSPA6P17066 643 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 CTNNA2P26232 953 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 AARSP49588 968 aaKnown RBP eCLIP27.45■■□□□ 1.98
CPNE1-216ENST00000437340 FAM193AP78312 1265 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 TFAMQ00059 246 aaKnown RBP27.45■■□□□ 1.98
CPNE1-216ENST00000437340 MAP2K5Q13163 448 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 PAK2Q13177 524 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 GRIK4Q16099 956 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 FAXDC2Q96IV6 333 aa27.45■■□□□ 1.98
CPNE1-216ENST00000437340 CLSTN1O94985 981 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 CALCAP01258 141 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 CTGFP29279 349 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 CTNNA1P35221 906 aaKnown RBP27.44■■□□□ 1.98
CPNE1-216ENST00000437340 PEX5P50542 639 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 EFCAB13Q8IY85 973 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 CCDC26Q8TAB7 109 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 MED4Q9NPJ6 270 aa27.44■■□□□ 1.98
CPNE1-216ENST00000437340 TMEM110-MUSTN1A8MSY1 372 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 GPR25O00155 361 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 NOMO3P69849 1222 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 NAA35Q5VZE5 725 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 MON1BQ7L1V2 547 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 MAATS1Q7Z4T9 603 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 CEP120Q8N960 986 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 CYFIP2Q96F07 1278 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 HINFPQ9BQA5 517 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 CHORDC1Q9UHD1 332 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-216ENST00000437340 GOLGA6L10A0A0M3HER8 536 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 RRN3P2A6NIE6 340 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 BHMG1C9JSJ3 638 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-216ENST00000437340 SPOPO43791 374 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 ZNF410Q86VK4 478 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 PHF13Q86YI8 300 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-216ENST00000437340 CPA5Q8WXQ8 436 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 USP6NLQ92738 828 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 PDZD7Q9H5P4 517 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 PCDHA3Q9Y5H8 950 aa27.43■■□□□ 1.98
CPNE1-216ENST00000437340 H3BQF6 201 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 THAP12O43422 761 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 VTNP04004 478 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 OSTNP61366 133 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 YWHAEP62258 255 aaKnown RBP27.42■■□□□ 1.98
CPNE1-216ENST00000437340 ZNF699Q32M78 642 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 HSP90B2PQ58FF3 399 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 MARCH8Q5T0T0 291 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 LIN9Q5TKA1 542 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 SND1Q7KZF4 910 aaKnown RBP eCLIP27.42■■□□□ 1.98
CPNE1-216ENST00000437340 KRT35Q92764 455 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 XYLT2Q9H1B5 865 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 ASB7Q9H672 318 aa27.42■■□□□ 1.98
CPNE1-216ENST00000437340 TNPO2O14787 897 aaKnown RBP27.41■■□□□ 1.98
CPNE1-216ENST00000437340 STAG3L1P0CL83 205 aa27.41■■□□□ 1.98
CPNE1-216ENST00000437340 CXCL8P10145 99 aa27.41■■□□□ 1.98
CPNE1-216ENST00000437340 ITGA4P13612 1032 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms