RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 SNRPFP62306 86 aaKnown RBP11.91□□□□□ -0.5
HMGCL-204ENST00000436439 POU5F1BQ06416 359 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 SPAG1Q07617 926 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 DSC1Q08554 894 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 TPD52L1Q16890 204 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-204ENST00000436439 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 MAEAQ7L5Y9 396 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 TDRD5Q8NAT2 981 aaKnown RBP11.91□□□□□ -0.5
HMGCL-204ENST00000436439 TMEM161BQ8NDZ6 487 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 GSTCDQ8NEC7 633 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 HERC2P3Q9BVR0 1158 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 APOL6Q9BWW8 343 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 POLR3FQ9H1D9 316 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-204ENST00000436439 TMEM206Q9H813 350 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 POLD4Q9HCU8 107 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 KMT5AQ9NQR1 393 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 SAMSN1Q9NSI8 373 aaKnown RBP11.91□□□□□ -0.5
HMGCL-204ENST00000436439 CGNQ9P2M7 1197 aaKnown RBP11.91□□□□□ -0.5
HMGCL-204ENST00000436439 ARHGAP28Q9P2N2 729 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 LRRC10BA6NIK2 292 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 PRPF6O94906 941 aaKnown RBP11.9□□□□□ -0.5
HMGCL-204ENST00000436439 AKAP5P24588 427 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 PTPN5P54829 565 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 FKBP3Q00688 224 aaKnown RBP11.9□□□□□ -0.5
HMGCL-204ENST00000436439 TFDP1Q14186 410 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-204ENST00000436439 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 PPFIBP1Q86W92 1011 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 FAM114A1Q8IWE2 563 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 ZDHHC14Q8IZN3 488 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 CSGALNACT2Q8N6G5 542 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 BSNDQ8WZ55 320 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 CEP63Q96MT8 703 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 EMILIN2Q9BXX0 1053 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 SFXN1Q9H9B4 322 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 UBN1Q9NPG3 1134 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 MRPL17Q9NRX2 175 aaKnown RBP11.9□□□□□ -0.5
HMGCL-204ENST00000436439 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 CACNG4Q9UBN1 327 aa11.9□□□□□ -0.5
HMGCL-204ENST00000436439 USP34Q70CQ2 3546 aa11.9□□□□□ -0.51
HMGCL-204ENST00000436439 VWA8A3KMH1 1905 aa11.9□□□□□ -0.51
HMGCL-204ENST00000436439 PHLPP2Q6ZVD8 1323 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 DOCK8Q8NF50 2099 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 SLC16A4O15374 487 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 TEX28O15482 410 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 CALUO43852 315 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 NPTXRO95502 500 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 URODP06132 367 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 MARSP56192 900 aaKnown RBP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 FANCCQ00597 558 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 MYBPC2Q14324 1141 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 PCBP1Q15365 356 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 ZC2HC1CQ53FD0 456 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 KIAA0319Q5VV43 1072 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 SLC9A9Q8IVB4 645 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 MAP4K3Q8IVH8 894 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 C12orf56Q8IXR9 622 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 UBALD2Q8IYN6 164 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 CCDC51Q96ER9 411 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 B3GALT6Q96L58 329 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 ACCSQ96QU6 501 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 RPS6KC1Q96S38 1066 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 SRRTQ9BXP5 876 aaKnown RBP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 NFKBIZQ9BYH8 718 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 TMEM134Q9H6X4 195 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 MAN1C1Q9NR34 630 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
HMGCL-204ENST00000436439 EXOC7Q9UPT5 735 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 GIT1Q9Y2X7 761 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 DOCK6Q96HP0 2047 aa11.89□□□□□ -0.51
HMGCL-204ENST00000436439 LRRIQ4A6NIV6 560 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 N4BP1O75113 896 aaKnown RBP11.88□□□□□ -0.51
HMGCL-204ENST00000436439 EDN1P05305 212 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
HMGCL-204ENST00000436439 RPL13P26373 211 aaKnown RBP11.88□□□□□ -0.51
HMGCL-204ENST00000436439 GLUD2P49448 558 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 EFNA5P52803 228 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 KCNA1Q09470 495 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 TCP11X2Q5H9J9 407 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 CDCA2Q69YH5 1023 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-204ENST00000436439 SLC27A1Q6PCB7 646 aa11.88□□□□□ -0.51
HMGCL-204ENST00000436439 APTXQ7Z2E3 356 aaKnown RBP11.88□□□□□ -0.51
HMGCL-204ENST00000436439 DRC7Q8IY82 874 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms