RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SMOC2Q9H3U7 446 aa19.89■□□□□ 0.77
HMGN1-207ENST00000436324 CUEDC2Q9H467 287 aa19.89■□□□□ 0.77
HMGN1-207ENST00000436324 C5orf42Q9H799 3197 aa19.89■□□□□ 0.77
HMGN1-207ENST00000436324 OLFML3Q9NRN5 406 aa19.89■□□□□ 0.77
HMGN1-207ENST00000436324 FAM13BQ9NYF5 915 aa19.89■□□□□ 0.77
HMGN1-207ENST00000436324 POLIQ9UNA4 740 aa19.89■□□□□ 0.77
HMGN1-207ENST00000436324 TMEM221A6NGB7 291 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 H7C4K7 107 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 M0R296 226 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 PPEF2O14830 753 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 ADRB2P07550 413 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 LRPAP1P30533 357 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 ASIC1P78348 528 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 TMEM132DQ14C87 1099 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 POSTNQ15063 836 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 CTXN3Q4LDR2 81 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 CD302Q8IX05 232 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 BEST2Q8NFU1 509 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 NOC3LQ8WTT2 800 aaKnown RBP19.88■□□□□ 0.77
HMGN1-207ENST00000436324 SAAL1Q96ER3 474 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 KBTBD4Q9NVX7 518 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 RCOR1Q9UKL0 485 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 ZDHHC9Q9Y397 364 aa19.88■□□□□ 0.77
HMGN1-207ENST00000436324 TIMM13Q9Y5L4 95 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-207ENST00000436324 N4BP1O75113 896 aaKnown RBP19.87■□□□□ 0.77
HMGN1-207ENST00000436324 CASP1P29466 404 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 NTHL1P78549 312 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 AMPD3Q01432 767 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 ROR1Q01973 937 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 SPATA1Q5VX52 437 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 RESP18Q5W5W9 173 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 DSTYKQ6XUX3 929 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 GET4Q7L5D6 327 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-207ENST00000436324 GRASPQ7Z6J2 395 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-207ENST00000436324 GLIS3Q8NEA6 775 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 ZSWIM2Q8NEG5 633 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 APPL2Q8NEU8 664 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 MYADMQ96S97 322 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 FAM213AQ9BRX8 229 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 RHOBTB2Q9BYZ6 727 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 TRIM9Q9C026 710 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 FBXL5Q9UKA1 691 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 PCDHB8Q9UN66 801 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 SORCS3Q9UPU3 1222 aa19.87■□□□□ 0.77
HMGN1-207ENST00000436324 GOLGA8IPA6NC78 632 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 GOLGA8JA6NMD2 632 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 SIGLEC14Q08ET2 396 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 ALCAMQ13740 583 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 MRPL58Q14197 206 aaKnown RBP19.86■□□□□ 0.77
HMGN1-207ENST00000436324 CRELD2Q6UXH1 353 aaPredicted RBP19.86■□□□□ 0.77
HMGN1-207ENST00000436324 PBXIP1Q96AQ6 731 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 TSPAN18Q96SJ8 248 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 BLZF1Q9H2G9 400 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 PCIF1Q9H4Z3 704 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 HCN4Q9Y3Q4 1203 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 C2orf16Q68DN1 1984 aa19.86■□□□□ 0.77
HMGN1-207ENST00000436324 WDR27A2RRH5 827 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 TBC1D4O60343 1298 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 HNRNPA1P09651 372 aaKnown RBP eCLIP19.85■□□□□ 0.77
HMGN1-207ENST00000436324 ELF1P32519 619 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 AFMP43652 599 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 MTMR3Q13615 1198 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 C9orf57Q5W0N0 161 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 SLC8B1Q6J4K2 584 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 ZNF280DQ6N043 979 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 C7orf25Q9BPX7 421 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 CBWD1Q9BRT8 395 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 ASB7Q9H672 318 aa19.85■□□□□ 0.77
HMGN1-207ENST00000436324 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.85■□□□□ 0.77
HMGN1-207ENST00000436324 XYLBO75191 536 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 PAPLNO95428 1278 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 FSHRP23945 695 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 UVSSAQ2YD98 709 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 USP37Q86T82 979 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 GRAMD1CQ8IYS0 662 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 ST13P5Q8NFI4 369 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-207ENST00000436324 ZNF461Q8TAF7 563 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 TMEM206Q9H813 350 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 CYP4F11Q9HBI6 524 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 HCFC1R1Q9NWW0 138 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 DPP3Q9NY33 737 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 SERTAD1Q9UHV2 236 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 KCNH3Q9ULD8 1083 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 DERAQ9Y315 318 aa19.84■□□□□ 0.77
HMGN1-207ENST00000436324 MTCL1Q9Y4B5 1905 aaKnown RBP19.83■□□□□ 0.77
HMGN1-207ENST00000436324 M0QZQ0 153 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 PRRG1O14668 218 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 ABLIM3O94929 683 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 CPB1P15086 417 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 GARTP22102 1010 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 HOXA9P31269 272 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 WNT7BP56706 349 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 LILRA4P59901 499 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 KRT85P78386 507 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 YWHAHQ04917 246 aaPredicted RBP19.83■□□□□ 0.77
HMGN1-207ENST00000436324 ARMCX5Q6P1M9 558 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 STXBP4Q6ZWJ1 553 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 EFCAB13Q8IY85 973 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 UBALD2Q8IYN6 164 aa19.83■□□□□ 0.77
HMGN1-207ENST00000436324 LEO1Q8WVC0 666 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms