RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MARCKSP29966 332 aaPredicted RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 RPL9P32969 192 aaKnown RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 MCM4P33991 863 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 PRPHP41219 470 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 GPC5P78333 572 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 PRKCQQ04759 706 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 NOLC1Q14978 699 aaKnown RBP eCLIP8.48□□□□□ -1.05
VPS50-203ENST00000436177 NAB2Q15742 525 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 MLF2Q15773 248 aaPredicted RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 UPP1Q16831 310 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 CTXN3Q4LDR2 81 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 RILPL1Q5EBL4 403 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 ZNF787Q6DD87 383 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 IQCEQ6IPM2 695 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 ZNF280DQ6N043 979 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 PARM1Q6UWI2 310 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 MPZL3Q6UWV2 235 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 C1orf210Q8IVY1 113 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 NPAS3Q8IXF0 933 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 APPL2Q8NEU8 664 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 PJA1Q8NG27 643 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 ITFG1Q8TB96 612 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 FGF14Q92915 247 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 SNX27Q96L92 541 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 ACO2Q99798 780 aaKnown RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 RUSC1Q9BVN2 902 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 TARS2Q9BW92 718 aaKnown RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 FOXQ1Q9C009 403 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 TMEM134Q9H6X4 195 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 SPATA6Q9NWH7 488 aaPredicted RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 MRPS17Q9Y2R5 130 aaKnown RBP8.48□□□□□ -1.05
VPS50-203ENST00000436177 PCDHB6Q9Y5E3 794 aa8.48□□□□□ -1.05
VPS50-203ENST00000436177 GPR179Q6PRD1 2367 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 KANSL1LA0AUZ9 987 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 PP2D1A8MPX8 630 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 E9PMD0 336 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 ZNF197O14709 1029 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 NCAM2O15394 837 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 CLDN3O15551 220 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 LAMTOR5O43504 91 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 KINO60870 393 aaKnown RBP8.47□□□□□ -1.05
VPS50-203ENST00000436177 TOM1L1O75674 476 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 EDN1P05305 212 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 KRT18P05783 430 aaKnown RBP8.47□□□□□ -1.05
VPS50-203ENST00000436177 RHOP08100 348 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 KCNE1P15382 129 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 GUCY2CP25092 1073 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 MAGEA9P43362 315 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 BRCC3P46736 316 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 ROR1Q01973 937 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 RAD51AP2Q09MP3 1159 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 SNW1Q13573 536 aaKnown RBP8.47□□□□□ -1.05
VPS50-203ENST00000436177 RABEP1Q15276 862 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 ECM1Q16610 540 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 CYP4A22Q5TCH4 519 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 SLC8B1Q6J4K2 584 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 PDZD4Q76G19 769 aaPredicted RBP8.47□□□□□ -1.05
VPS50-203ENST00000436177 USP37Q86T82 979 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 CEP120Q8N960 986 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 ZNF461Q8TAF7 563 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 CORO1BQ9BR76 489 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 SLITRK6Q9H5Y7 841 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 CYP4F11Q9HBI6 524 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
VPS50-203ENST00000436177 HCFC1R1Q9NWW0 138 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 ARHGAP28Q9P2N2 729 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 R4GN57 208 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 ZNF292O60281 2723 aa8.47□□□□□ -1.05
VPS50-203ENST00000436177 TDRD15B5MCY1 1934 aaKnown RBP8.46□□□□□ -1.05
VPS50-203ENST00000436177 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.05
VPS50-203ENST00000436177 VWA3AA6NCI4 1184 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 SFI1A8K8P3 1242 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 HNRNPDLO14979 420 aaKnown RBP8.46□□□□□ -1.06
VPS50-203ENST00000436177 XPOTO43592 962 aaKnown RBP8.46□□□□□ -1.06
VPS50-203ENST00000436177 ECI2O75521 394 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 CLTAP09496 248 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 PLS3P13797 630 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 PTPN2P17706 415 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 CDC25AP30304 524 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 LIG4P49917 911 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 STARD6P59095 220 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 KYAT1Q16773 422 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 SLC44A4Q53GD3 710 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 ZBTB41Q5SVQ8 909 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 TPGS2Q68CL5 300 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 RINT1Q6NUQ1 792 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 RSPO2Q6UXX9 243 aaPredicted RBP8.46□□□□□ -1.06
VPS50-203ENST00000436177 ZPBP2Q6X784 338 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 TPRG1Q6ZUI0 275 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 DAW1Q8N136 415 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 C4orf32Q8N8J7 132 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 LEMD2Q8NC56 503 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 C3orf58Q8NDZ4 430 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
VPS50-203ENST00000436177 ATRIPQ8WXE1 791 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms