RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 TTLL13PA6NNM8 815 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 KIAA0754O94854 1291 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ACSL3O95573 720 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CLTAP09496 248 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 DESP17661 470 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 YWHAEP62258 255 aaKnown RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 NFX1Q12986 1120 aaKnown RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 MGARPQ8TDB4 240 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 SLC5A4Q9NY91 659 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 LTBP1Q14766 1721 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 SYNJ2BP-COX16A0A087WUM0 186 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 P4HA1P13674 534 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 PPP2R5EQ16537 467 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 GPR20Q99678 358 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CALN1Q9BXU9 219 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ST6GALNAC4Q9H4F1 302 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 UVRAGQ9P2Y5 699 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 A0A0G2JLL6 359 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CST3P01034 146 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ATF2P15336 505 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 PSMA2P25787 234 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ZACNQ401N2 412 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 C1orf220Q5T0J3 134 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 PRRT2Q7Z6L0 340 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 IPO4Q8TEX9 1081 aaKnown RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 SETD4Q9NVD3 440 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 H3BRB1 525 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 ATP2A1O14983 1001 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 GRAP2O75791 330 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 GZMAP12544 262 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 POLR2BP30876 1174 aaKnown RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 MTM1Q13496 603 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 SURF1Q15526 300 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 SH3D19Q5HYK7 790 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 MAK16Q9BXY0 300 aaKnown RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 NIF3L1Q9GZT8 377 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 GBA2Q9HCG7 927 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 M0QYV0 167 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 NEFHP12036 1026 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 PSMC1P62191 440 aaKnown RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 LAMC2Q13753 1193 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 CLEC16AQ2KHT3 1053 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 SGSM1Q2NKQ1 1148 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 SMTNL2Q2TAL5 461 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 TAS1R3Q7RTX0 852 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 LMO3Q8TAP4 145 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 CISHQ9NSE2 258 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 KIAA0391O15091 583 aaKnown RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 MPZL3Q6UWV2 235 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 OR6B3Q8NGW1 331 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 UBA3Q8TBC4 463 aa12.94□□□□□ -0.34
CLDN4-203ENST00000435050 NTPCRQ9BSD7 190 aaKnown RBP12.94□□□□□ -0.34
CLDN4-203ENST00000435050 E7EVH7 732 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 CHRNB2P17787 502 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 CCT5P48643 541 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 RGS7P49802 495 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 GCNT1Q02742 428 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 AMHR2Q16671 573 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 PNMA8AQ86V59 439 aaPredicted RBP12.93□□□□□ -0.34
CLDN4-203ENST00000435050 AENQ8WTP8 325 aaKnown RBP12.93□□□□□ -0.34
CLDN4-203ENST00000435050 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 HSPH1Q92598 858 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.93□□□□□ -0.34
CLDN4-203ENST00000435050 RGS16O15492 202 aaPredicted RBP12.93□□□□□ -0.34
CLDN4-203ENST00000435050 LGALS2P05162 132 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 ACTN2P35609 894 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 WNT7BP56706 349 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 CLUL1Q15846 466 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 MCOLN2Q8IZK6 566 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 ARFGAP2Q8N6H7 521 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
CLDN4-203ENST00000435050 PCYT2Q99447 389 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 GPR88Q9GZN0 384 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 AP5M1Q9H0R1 490 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 RNF8O76064 485 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 KRT10P13645 584 aa12.93□□□□□ -0.34
CLDN4-203ENST00000435050 ARL2P36404 184 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms