RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 SLC9A9Q8IVB4 645 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 NELFBQ8WX92 580 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 EEF2KMTQ96G04 330 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 CGRRF1Q99675 332 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 EYSQ5T1H1 3165 aa16.77■□□□□ 0.27
TREX1-201ENST00000433541 TRIM49BA6NDI0 452 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 NCK2O43639 380 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 ADH1AP07327 375 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 EPB41P11171 864 aaKnown RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 TKTP29401 623 aaKnown RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 POLR2BP30876 1174 aaKnown RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 PSMC2P35998 433 aaKnown RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 CASP4P49662 377 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 DSG1Q02413 1049 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 LRRC63Q05C16 580 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 BFSP1Q12934 665 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 PAK1Q13153 545 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 BIRC3Q13489 604 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 MYBPC2Q14324 1141 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 PSMD5Q16401 504 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 EDRF1Q3B7T1 1238 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 COBLL1Q53SF7 1204 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 PDXDC1Q6P996 788 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 HLA-CQ95604 372 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 DHTKD1Q96HY7 919 aaPredicted RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 FAM84AQ96KN4 292 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 POP1Q99575 1024 aaKnown RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 CDCA3Q99618 268 aaPredicted RBP16.76■□□□□ 0.27
TREX1-201ENST00000433541 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 ITGA11Q9UKX5 1188 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
TREX1-201ENST00000433541 ARHGEF37A1IGU5 675 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 PPEF2O14830 753 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
TREX1-201ENST00000433541 IGFBP6P24592 240 aaPredicted RBP16.75■□□□□ 0.27
TREX1-201ENST00000433541 CCNE1P24864 410 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 PNPLA4P41247 253 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 TAF6P49848 677 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 STX17P56962 302 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 FKBP3Q00688 224 aaKnown RBP16.75■□□□□ 0.27
TREX1-201ENST00000433541 TRPC3Q13507 836 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 SV2CQ496J9 727 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 ANKRD40Q6AI12 368 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 CENPPQ6IPU0 288 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
TREX1-201ENST00000433541 DMAC2Q9NW81 257 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 THEGQ9P2T0 379 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 COL6A3P12111 3177 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 PLXNA3P51805 1871 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 BRWD1Q9NSI6 2320 aa16.75■□□□□ 0.27
TREX1-201ENST00000433541 LINC01565O15544 149 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 CNPP09543 421 aaKnown RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 ODC1P11926 461 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 KCNA5P22460 613 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 VAMP7P51809 220 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 ARPP19P56211 112 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 RBP5P82980 135 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 NFIL3Q16649 462 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 DUSP6Q16828 381 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 ZCWPW2Q504Y3 356 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 TCERG1LQ5VWI1 586 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 ANKS3Q6ZW76 656 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 INTS8Q75QN2 995 aaKnown RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 PPFIBP1Q86W92 1011 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 C1orf127Q8N9H9 656 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 SUSD3Q96L08 255 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 MFSD14AQ96MC6 490 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 UBE2ZQ9H832 354 aaPredicted RBP16.74■□□□□ 0.27
TREX1-201ENST00000433541 PRDM6Q9NQX0 595 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 CHST7Q9NS84 486 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 IRAK3Q9Y616 596 aa16.74■□□□□ 0.27
TREX1-201ENST00000433541 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 MTCL1Q9Y4B5 1905 aaKnown RBP16.73■□□□□ 0.27
TREX1-201ENST00000433541 PRUNE2Q8WUY3 3088 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
TREX1-201ENST00000433541 H7C4K7 107 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 SYN3O14994 580 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 CLASP2O75122 1294 aaKnown RBP16.73■□□□□ 0.27
TREX1-201ENST00000433541 AKAP3O75969 853 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 PTMSP20962 102 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 BMP6P22004 513 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 PMS1P54277 932 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms