RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
NEFM-202ENST00000433454 SLC35F6Q8N357 371 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 APOL6Q9BWW8 343 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 PAK6Q9NQU5 681 aaPredicted RBP11.34□□□□□ -0.59
NEFM-202ENST00000433454 CHST12Q9NRB3 414 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 CNTN3Q9P232 1028 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 IPPQ9Y573 584 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 PCDHB4Q9Y5E5 795 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 DNM1LO00429 736 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 H2AFZP0C0S5 128 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 CDR2Q01850 454 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 PAK2Q13177 524 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 ZNF667Q5HYK9 610 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 TMEM270Q6UE05 265 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 H2AFVQ71UI9 128 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 SLC43A3Q8NBI5 491 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 FAXDC2Q96IV6 333 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 ALS2CR12Q96Q35 445 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 PACSIN1Q9BY11 444 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 ACP6Q9NPH0 428 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 DPP3Q9NY33 737 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 INTUQ9ULD6 942 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 PCDHB2Q9Y5E7 798 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 CTAGE9A4FU28 777 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 AKAP5P24588 427 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 POLR2BP30876 1174 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 ASPAP45381 313 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 YWHAEP62258 255 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 RBP5P82980 135 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 PDCD11Q14690 1871 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 TRIM71Q2Q1W2 868 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 FBXO47Q5MNV8 452 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 TAF3Q5VWG9 929 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 RNF10Q8N5U6 811 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 TRIM58Q8NG06 486 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 CXorf38Q8TB03 319 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 NOX5Q96PH1 765 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 VRTNQ9H8Y1 702 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 PARP2Q9UGN5 583 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 CNTN6Q9UQ52 1028 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 BTNL10A8MVZ5 291 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 TACC1O75410 805 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 P4HA1P13674 534 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 WDR72Q3MJ13 1102 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 FAM26DQ5JW98 314 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 SCARA5Q6ZMJ2 495 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 ZNF677Q86XU0 584 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 PALB2Q86YC2 1186 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 HACE1Q8IYU2 909 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 RBBP8NLQ8NC74 664 aaPredicted RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 SMG8Q8ND04 991 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 BEST2Q8NFU1 509 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 DEFB118Q96PH6 123 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 NAPGQ99747 312 aaPredicted RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 SEZ6LQ9BYH1 1024 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 TRPV6Q9H1D0 765 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
NEFM-202ENST00000433454 NXF1Q9UBU9 619 aaKnown RBP11.33□□□□□ -0.6
NEFM-202ENST00000433454 TMCO5BA8MYB1 307 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 ARVCFO00192 962 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 MYCP01106 439 aaPredicted RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 MMEP08473 750 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 GHRP10912 638 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 ZSCAN20P17040 1043 aaPredicted RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 CHRNB2P17787 502 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 GUCY2FP51841 1108 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 FMO1Q01740 532 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 UBR7Q8N806 425 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 HPDLQ96IR7 371 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 ERVK-5Q9HDB9 667 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 PADI3Q9ULW8 664 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 UBQLN1Q9UMX0 589 aaKnown RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 AGAP1Q9UPQ3 857 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 CAPN6Q9Y6Q1 641 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 URI1O94763 535 aaPredicted RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 MOCS3O95396 460 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 STAU1O95793 577 aaKnown RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 GZMAP12544 262 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 CD58P19256 250 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 GNA15P30679 374 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 CD52P31358 61 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 ZNF132P52740 706 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 NAP1L1P55209 391 aaKnown RBP11.32□□□□□ -0.6
NEFM-202ENST00000433454 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 LPIN1Q14693 890 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 MTFR1Q15390 333 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 ZBTB6Q15916 424 aa11.32□□□□□ -0.6
NEFM-202ENST00000433454 ZNF618Q5T7W0 954 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms