RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TAOK1Q7L7X3 1001 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PEX26Q7Z412 305 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 NKAIN3Q8N8D7 197 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 FAM133AQ8N9E0 248 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 HPS3Q969F9 1004 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 DCPSQ96C86 337 aaKnown RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 IFT74Q96LB3 600 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RUNDC3BQ96NL0 473 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 SYT11Q9BT88 431 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 ASPSCR1Q9BZE9 553 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 INTS9Q9NV88 658 aaKnown RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PANK4Q9NVE7 773 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 IP6K2Q9UHH9 426 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 AGAP1Q9UPQ3 857 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 USP15Q9Y4E8 981 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 LRRC42Q9Y546 428 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PCDHA3Q9Y5H8 950 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RPTORQ8N122 1335 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 KDM3AQ9Y4C1 1321 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PNMA6FA0A0J9YX94 578 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 BBOX1O75936 387 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 DXOO77932 396 aaKnown RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 NTSR2O95665 410 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 GGPS1O95749 300 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 ITGA4P13612 1032 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RARGP13631 454 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 NEK3P51956 506 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RWDD2BP57060 319 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 MAPK7Q13164 816 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PLS1Q14651 629 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 CYP1B1Q16678 543 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PTPRNQ16849 979 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 SGSM1Q2NKQ1 1148 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 PARP6Q2NL67 630 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 LETM2Q2VYF4 491 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 C2orf27AQ580R0 203 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 FAM47AQ5JRC9 791 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 KIAA1755Q5JYT7 1200 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 SUSD4Q5VX71 490 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 DENND2CQ68D51 928 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 CAPRIN2Q6IMN6 1127 aaKnown RBP8.6□□□□□ -1.03
VTI1A-202ENST00000432306 VPS36Q86VN1 386 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 SP8Q8IXZ3 490 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 MDM1Q8TC05 714 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 TBCKQ8TEA7 893 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 FBF1Q8TES7 1133 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RFFLQ8WZ73 363 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 CSRNP1Q96S65 589 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 NT5C3AQ9H0P0 336 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 RXFP1Q9HBX9 757 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 GRHL1Q9NZI5 618 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 ANKIB1Q9P2G1 1089 aa8.6□□□□□ -1.03
VTI1A-202ENST00000432306 SMCO2A6NFE2 343 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 SLC16A3O15427 465 aaKnown RBP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 SUN1O94901 812 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 UBOX5O94941 541 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 EYA4O95677 639 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 NCAM1P13591 858 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 TYRP1P17643 537 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 MPSTP25325 297 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 HOXC13P31276 330 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 CHRNA3P32297 505 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 ALDH5A1P51649 535 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 PTPN5P54829 565 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 TFAP4Q01664 338 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 LBRQ14739 615 aaKnown RBP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 SF3B3Q15393 1217 aaKnown RBP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 CALCRLQ16602 461 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 NFIL3Q16649 462 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 BMT2Q1RMZ1 405 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 MAP7D1Q3KQU3 841 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 CAVIN4Q5BKX8 364 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 KRT79Q5XKE5 535 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 CYFIP1Q7L576 1253 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 HEATR3Q7Z4Q2 680 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 ARL6IP6Q8N6S5 226 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 ZFAND2BQ8WV99 257 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 SLCO2A1Q92959 643 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 GRAMD1AQ96CP6 724 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 SPDL1Q96EA4 605 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 CDK5RAP3Q96JB5 506 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 FAM84BQ96KN1 310 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 TMEM237Q96Q45 408 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.59□□□□□ -1.03
VTI1A-202ENST00000432306 AP1M1Q9BXS5 423 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 RIOX1Q9H6W3 641 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 LRRC4CQ9HCJ2 640 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 RASAL2Q9UJF2 1139 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 AMFRQ9UKV5 643 aa8.59□□□□□ -1.03
VTI1A-202ENST00000432306 KIAA0100Q14667 2235 aaKnown RBP8.59□□□□□ -1.04
VTI1A-202ENST00000432306 MIF4GDA9UHW6 222 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 C9IYK1 514 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 DDX3XO00571 662 aaKnown RBP eCLIP8.58□□□□□ -1.042e-9■■□□□ 14.2
VTI1A-202ENST00000432306 CETN3O15182 167 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms