RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 KIAA1614Q5VZ46 1190 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 NXNQ6DKJ4 435 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 LHFPL2Q6ZUX7 228 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 KCNK18Q7Z418 384 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 CBARPQ8N350 705 aaPredicted RBP2.79□□□□□ -1.96
CDC40-204ENST00000431461 ZFP28Q8NHY6 868 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 COG1Q8WTW3 980 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 JDP2Q8WYK2 163 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 HDAC10Q969S8 669 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 EAF2Q96CJ1 260 aaPredicted RBP2.79□□□□□ -1.96
CDC40-204ENST00000431461 PDLIM2Q96JY6 352 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 Q96MF0 132 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 CDC5LQ99459 802 aaKnown RBP2.79□□□□□ -1.96
CDC40-204ENST00000431461 QRSL1Q9H0R6 528 aaKnown RBP2.79□□□□□ -1.96
CDC40-204ENST00000431461 BCO1Q9HAY6 547 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 FOXJ2Q9P0K8 574 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 DPP7Q9UHL4 492 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 TMPRSS11EQ9UL52 423 aa2.79□□□□□ -1.96
CDC40-204ENST00000431461 LUC7L2Q9Y383 392 aaKnown RBP2.79□□□□□ -1.96
CDC40-204ENST00000431461 USP15Q9Y4E8 981 aaPredicted RBP2.79□□□□□ -1.96
CDC40-204ENST00000431461 CNTNAP2Q9UHC6 1331 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 CGB1A6NKQ9 187 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 KIF3BO15066 747 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 MT-CO1P00395 513 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 ELANEP08246 267 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 IL2RBP14784 551 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 HSPA6P17066 643 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 FDXRP22570 491 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 IARSP41252 1262 aaKnown RBP2.78□□□□□ -1.96
CDC40-204ENST00000431461 MGAT5Q09328 741 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 PDCD1Q15116 288 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 NFE2Q16621 373 aaPredicted RBP2.78□□□□□ -1.96
CDC40-204ENST00000431461 MINDY4Q4G0A6 757 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 KLHL22Q53GT1 634 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 CT83Q5H943 113 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 TOR2AQ5JU69 321 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 AGAP9Q5VTM2 703 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 ZNF425Q6IV72 752 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 Q6ZNX1 250 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 SLC41A1Q8IVJ1 513 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 RHOT2Q8IXI1 618 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 TMEM132CQ8N3T6 1108 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 CPA6Q8N4T0 437 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 SH2D3CQ8N5H7 860 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 GPR156Q8NFN8 814 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 SNX33Q8WV41 574 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 STAG1Q8WVM7 1258 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 CASKIN2Q8WXE0 1202 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 TFAP2CQ92754 450 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 HSPBAP1Q96EW2 488 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 FAM167AQ96KS9 214 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 NEU1Q99519 415 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 SMAD5Q99717 465 aaKnown RBP2.78□□□□□ -1.96
CDC40-204ENST00000431461 C7orf25Q9BPX7 421 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 FAM126AQ9BYI3 521 aaPredicted RBP2.78□□□□□ -1.96
CDC40-204ENST00000431461 CDH19Q9H159 772 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 KLK15Q9H2R5 256 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 NMRK2Q9NPI5 230 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 IL17RBQ9NRM6 502 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 TMEM74BQ9NUR3 256 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 TMEM140Q9NV12 185 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 GNL3LQ9NVN8 582 aaKnown RBP2.78□□□□□ -1.96
CDC40-204ENST00000431461 ASB6Q9NWX5 421 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 MOCS1Q9NZB8 636 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 ZNF180Q9UJW8 692 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 POLHQ9Y253 713 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 ATP11BQ9Y2G3 1177 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 PAXBP1Q9Y5B6 917 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 KAT6AQ92794 2004 aa2.78□□□□□ -1.96
CDC40-204ENST00000431461 TNKSO95271 1327 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 PRAMEF4O60810 478 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 NDUFS2O75306 463 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 OFD1O75665 1012 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 ABLIM3O94929 683 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 IL33O95760 270 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 FTH1P19P0C7X4 201 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 MCAMP43121 646 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 PER3P56645 1201 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 SRSF2Q01130 221 aaKnown RBP2.77□□□□□ -1.97
CDC40-204ENST00000431461 MCL1Q07820 350 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 RAB39AQ14964 217 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 ABCB5Q2M3G0 1257 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 MST1LQ2TV78 715 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 GFOD2Q3B7J2 385 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 SPDYE7PQ495Y7 208 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 B3GNTL1Q67FW5 361 aaPredicted RBP2.77□□□□□ -1.97
CDC40-204ENST00000431461 TTC7BQ86TV6 843 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 MAPKAPK5Q8IW41 473 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 TCEAL8Q8IYN2 117 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 CHPFQ8IZ52 775 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 FAM43AQ8N2R8 423 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 RNF169Q8NCN4 708 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 MTFMTQ96DP5 389 aaKnown RBP2.77□□□□□ -1.97
CDC40-204ENST00000431461 BOD1Q96IK1 185 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 PHACTR3Q96KR7 559 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 TEKT5Q96M29 485 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 PRDM11Q9NQV5 511 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 LANCL2Q9NS86 450 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 SLC17A6Q9P2U8 582 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 ZNF70Q9UC06 446 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms