RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 I3L4J1 428 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 IL18RAPO95256 599 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 LDHAP00338 332 aaKnown RBP9.91□□□□□ -0.82
HDAC9-211ENST00000430454 ODC1P11926 461 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 CPB1P15086 417 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 ATF2P15336 505 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 BRCC3P46736 316 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 PFKPQ01813 784 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 NHLH1Q02575 133 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 SOX4Q06945 474 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-211ENST00000430454 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-211ENST00000430454 TMEM132DQ14C87 1099 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 PABPC1LQ4VXU2 614 aaKnown RBP9.91□□□□□ -0.82
HDAC9-211ENST00000430454 CYP4A22Q5TCH4 519 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 ATL3Q6DD88 541 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 ZNF720Q7Z2F6 126 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 METTL23Q86XA0 190 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 NT5DC4Q86YG4 428 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 TCEAL8Q8IYN2 117 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 SYCP3Q8IZU3 236 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 SLC44A3Q8N4M1 653 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 DDX12PQ92771 950 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 ZNF512Q96ME7 567 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-211ENST00000430454 CXCL16Q9H2A7 254 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 TMEM206Q9H813 350 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 CYP4F11Q9HBI6 524 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 GDE1Q9NZC3 331 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 AGO2Q9UKV8 859 aaKnown RBP9.91□□□□□ -0.82
HDAC9-211ENST00000430454 CFAP45Q9UL16 551 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 MTMR6Q9Y217 621 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 C2CD2Q9Y426 696 aa9.91□□□□□ -0.82
HDAC9-211ENST00000430454 ANHXE9PGG2 379 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 M0QZQ0 153 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 KIAA0391O15091 583 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 SPTLC2O15270 562 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 GALR2O43603 387 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 PPP6R2O75170 966 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 MICAL2O94851 1124 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 ABLIM3O94929 683 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 OAZ2O95190 189 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 FGF19O95750 216 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 ADRB2P07550 413 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 IDEP14735 1019 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 NMT1P30419 496 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 PNPLA4P41247 253 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 NASPP49321 788 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 ROR1Q01973 937 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 ENOX2Q16206 610 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 SPECC1Q5M775 1068 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 SPATA1Q5VX52 437 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 PDZD4Q76G19 769 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 SIX5Q8N196 739 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 THEM5Q8N1Q8 247 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 IQUBQ8NA54 791 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 C3orf58Q8NDZ4 430 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 FLCNQ8NFG4 579 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 CACTINQ8WUQ7 758 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 ATOH1Q92858 354 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 FGF13Q92913 245 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 MYADMQ96S97 322 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 MAGEF1Q9HAY2 307 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 AVENQ9NQS1 362 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 OLFML3Q9NRN5 406 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 TUBGCP4Q9UGJ1 667 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 AFF4Q9UHB7 1163 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 FBXL5Q9UKA1 691 aa9.9□□□□□ -0.82
HDAC9-211ENST00000430454 CPSF3Q9UKF6 684 aaKnown RBP9.9□□□□□ -0.82
HDAC9-211ENST00000430454 TECTAO75443 2155 aa9.9□□□□□ -0.83
HDAC9-211ENST00000430454 MYH11P35749 1972 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 ADAM12O43184 909 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 CUTAO60888 179 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 GCNT3O95395 438 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 YEATS4O95619 227 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 TYMPP19971 482 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-211ENST00000430454 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 EPHB3P54753 998 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 GRIN1Q05586 938 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 HTR4Q13639 388 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 MYBPC2Q14324 1141 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 SURF1Q15526 300 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 ZBTB6Q15916 424 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 L1TD1Q5T7N2 865 aaKnown RBP9.89□□□□□ -0.83
HDAC9-211ENST00000430454 CD300LGQ6UXG3 332 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 SFR1Q86XK3 245 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 ZNF560Q96MR9 790 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 CLIC6Q96NY7 704 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 USP28Q96RU2 1077 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 GPR88Q9GZN0 384 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 SLC2A4RGQ9NR83 387 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 PANK4Q9NVE7 773 aa9.89□□□□□ -0.83
HDAC9-211ENST00000430454 FAM13BQ9NYF5 915 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms