RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CLDN3O15551 220 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 LRRN2O75325 713 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 PPP1R37O75864 691 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 ABLIM3O94929 683 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 NFICP08651 508 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 POU2F2P09086 479 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 SRFP11831 508 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 FCARP24071 287 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 LONP1P36776 959 aaKnown RBP12.85□□□□□ -0.35
HDAC4-202ENST00000430200 UBA7P41226 1012 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC4-202ENST00000430200 CASP5P51878 434 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 CEBPZQ03701 1054 aaKnown RBP12.85□□□□□ -0.35
HDAC4-202ENST00000430200 KCNA1Q09470 495 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 ELMSAN1Q6PJG2 1045 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 ANKS3Q6ZW76 656 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 SFR1Q86XK3 245 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 MAP4K3Q8IVH8 894 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 TTC9BQ8N6N2 239 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 DDX12PQ92771 950 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 KXD1Q9BQD3 176 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 CCSER1Q9C0I3 900 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 PARVGQ9HBI0 331 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
HDAC4-202ENST00000430200 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-202ENST00000430200 A0A0B4J269 797 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 ARHGEF37A1IGU5 675 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 MYMKA6NI61 221 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 SHISA7A6NL88 538 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 MOSPD3O75425 235 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 FAM13AO94988 1023 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 ADRB2P07550 413 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 RHOP08100 348 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 GLULP15104 373 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 LRPAP1P30533 357 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 MCM4P33991 863 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 LIG4P49917 911 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 CDR1P51861 262 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 ARPP19P56211 112 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
HDAC4-202ENST00000430200 PRSS36Q5K4E3 855 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 JADE1Q6IE81 842 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 PDXDC1Q6P996 788 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-202ENST00000430200 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 MYCT1Q8N699 235 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 BICD1Q96G01 975 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 CALML4Q96GE6 196 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 TMEM209Q96SK2 561 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 PLA2G2FQ9BZM2 168 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 FOXQ1Q9C009 403 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 MFSD1Q9H3U5 465 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 TBC1D17Q9HA65 648 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC4-202ENST00000430200 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 LARSQ9P2J5 1176 aaKnown RBP12.84□□□□□ -0.35
HDAC4-202ENST00000430200 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
HDAC4-202ENST00000430200 FBXL21Q9UKT6 434 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
HDAC4-202ENST00000430200 M0QZQ0 153 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 SYN3O14994 580 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 OGTO15294 1046 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 SLC26A4O43511 780 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 TRAK2O60296 914 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 CLTAP09496 248 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 RPL9P32969 192 aaKnown RBP12.83□□□□□ -0.36
HDAC4-202ENST00000430200 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.361e-7■■■■■ 27.8
HDAC4-202ENST00000430200 CLCN5P51795 746 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 SMTNP53814 917 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 GPC5P78333 572 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 GTF2BQ00403 316 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-202ENST00000430200 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 DYMQ7RTS9 669 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 ASCL5Q7RTU5 278 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 EFCAB13Q8IY85 973 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 CCDC105Q8IYK2 499 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 ZNF461Q8TAF7 563 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 ZHX3Q9H4I2 956 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 CEP72Q9P209 647 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 OTOGLQ3ZCN5 2332 aa12.83□□□□□ -0.36
HDAC4-202ENST00000430200 TRAPPC3O43617 180 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 XYLBO75191 536 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 TBCAO75347 108 aaKnown RBP12.82□□□□□ -0.36
HDAC4-202ENST00000430200 BMP15O95972 392 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms