RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 PRKACAP17612 351 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CDH2P19022 906 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 TARSP26639 723 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CASP1P29466 404 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 HOXC13P31276 330 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CXCR5P32302 372 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 SLC26A3P40879 764 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CBX5P45973 191 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 HLTFQ14527 1009 aaKnown RBP eCLIP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 USP41Q3LFD5 358 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 DALRD3Q5D0E6 543 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 HERC4Q5GLZ8 1057 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CCDC62Q6P9F0 684 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PRR23CQ6ZRP0 262 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CCDC129Q6ZRS4 1044 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 MCM10Q7L590 875 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CROCCP3Q8IVE0 287 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 RNF169Q8NCN4 708 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 TTLQ8NG68 377 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ATL1Q8WXF7 558 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PGBD4Q96DM1 585 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 METTL2AQ96IZ6 378 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ECSITQ9BQ95 431 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 AIFM2Q9BRQ8 373 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CUEDC2Q9H467 287 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 SMARCAD1Q9H4L7 1026 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 EPB41L4AQ9HCS5 686 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 WDR6Q9NNW5 1121 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 WASH6PQ9NQA3 447 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 FGFR1OP2Q9NVK5 253 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 HAO1Q9UJM8 370 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 TMEM59LQ9UK28 342 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 MAN1B1Q9UKM7 699 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PCDHA12Q9UN75 941 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 HPS5Q9UPZ3 1129 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CHKBQ9Y259 395 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 IFT52Q9Y366 437 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ROBO2Q9HCK4 1378 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PABPN1LA6NDY0 278 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 TMX2-CTNND1H3BSU7 103 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CAPN9O14815 690 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 TRMUO75648 421 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PSMG1O95456 288 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 IDEP14735 1019 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 POLR2CP19387 275 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 IFNA8P32881 189 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 BTDP43251 543 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 VCPP55072 806 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 POLR2GP62487 172 aaKnown RBP eCLIP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 SELENBP1Q13228 472 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ACVR2BQ13705 512 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 APOFQ13790 326 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 RFTN1Q14699 578 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 CNGA2Q16280 664 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ANO4Q32M45 955 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 TJAP1Q5JTD0 557 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ALKBH2Q6NS38 261 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 GPR153Q6NV75 609 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 C8orf74Q6P047 294 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 BORAQ6PGQ7 559 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ZNF410Q86VK4 478 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PASD1Q8IV76 773 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 KSR1Q8IVT5 923 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 ADGRG5Q8IZF4 528 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 DEPDC4Q8N2C3 294 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 AGGF1Q8N302 714 aaeCLIP4.63□□□□□ -1.674e-8■■■□□ 16.3
R3HDM1-206ENST00000429703 VGLL2Q8N8G2 317 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PNMA1Q8ND90 353 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 INTS12Q96CB8 462 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 MRRFQ96E11 262 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 DNAJC7Q99615 494 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 UNKQ9C0B0 810 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 MMRN2Q9H8L6 949 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 GIN1Q9NXP7 522 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 SEPT10Q9P0V9 454 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 GMIPQ9P107 970 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 LARSQ9P2J5 1176 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 DSEQ9UL01 958 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PCDHA5Q9Y5H7 936 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 NUP188Q5SRE5 1749 aa4.63□□□□□ -1.67
R3HDM1-206ENST00000429703 PNMA6FA0A0J9YX94 578 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 RHOBTB3O94955 611 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 ZBTB48P10074 688 aaPredicted RBP4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 HOXB3P14651 431 aaPredicted RBP4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 ALAS2P22557 587 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 CMA1P23946 247 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 ATP5DP30049 168 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 IARSP41252 1262 aaKnown RBP4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 RAB15P59190 212 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 KLHL30Q0D2K2 578 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 SNTA1Q13424 505 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 MORC3Q14149 939 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 ZNF827Q17R98 1081 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 EDRF1Q3B7T1 1238 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 OGFOD2Q6N063 350 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 IZUMO2Q6UXV1 221 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 AGMOQ6ZNB7 445 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 CYB5R4Q7L1T6 521 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 TMC3Q7Z5M5 1100 aa4.62□□□□□ -1.67
R3HDM1-206ENST00000429703 CAND1Q86VP6 1230 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms