RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 EOMESO95936 686 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 NFICP08651 508 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 PAEPP09466 180 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 HSPA8P11142 646 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 SELPP16109 830 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 FGFR4P22455 802 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 LRPAP1P30533 357 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF132P52740 706 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 APBA1Q02410 837 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 LPIN1Q14693 890 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF667Q5HYK9 610 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 KIAA1328Q86T90 577 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 TMEM192Q8IY95 271 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 SPATA18Q8TC71 538 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 APBB2Q92870 758 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 WNT8BQ93098 351 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 DEFB118Q96PH6 123 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 DESI2Q9BSY9 194 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 NXF3Q9H4D5 531 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 TRMT13Q9NUP7 481 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 REXO2Q9Y3B8 237 aaKnown RBP9.73□□□□□ -0.85
NR1I3-209ENST00000428574 PCDHA13Q9Y5I0 950 aa9.73□□□□□ -0.85
NR1I3-209ENST00000428574 A0A087X0T9 212 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF263O14978 683 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 FAM228BP0C875 321 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 TNNT1P13805 278 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 MAGEA1P43355 309 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ASPAP45381 313 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 MYL6P60660 151 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 OSTNP61366 133 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 CDR2Q01850 454 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ISCUQ9H1K1 167 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
NR1I3-209ENST00000428574 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 SNTG2Q9NY99 539 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
NR1I3-209ENST00000428574 ANK1P16157 1881 aa9.71□□□□□ -0.85
NR1I3-209ENST00000428574 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 DDX3XO00571 662 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-209ENST00000428574 LRRN2O75325 713 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-209ENST00000428574 ITGB3P05106 788 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-209ENST00000428574 CTSHP09668 335 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 ITGA4P13612 1032 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 CYP11B1P15538 503 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 RPL9P32969 192 aaKnown RBP9.71□□□□□ -0.86
NR1I3-209ENST00000428574 RFC2P35250 354 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 GJA8P48165 433 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 TERF1P54274 439 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 ARID5AQ03989 594 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 MTFR1Q15390 333 aa9.71□□□□□ -0.86
NR1I3-209ENST00000428574 STILQ15468 1287 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms