RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZBTB45Q96K62 511 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 ZMAT2Q96NC0 199 aaKnown RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 APOL6Q9BWW8 343 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 HAPLN2Q9GZV7 340 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 ANKFY1Q9P2R3 1169 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 DSEQ9UL01 958 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 NR2E1Q9Y466 385 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 USP15Q9Y4E8 981 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 TCHHQ07283 1943 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 PIRO00625 290 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 MAPK13O15264 365 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 LINC01565O15544 149 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 MEFVO15553 781 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 ACTN4O43707 911 aaKnown RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 EXTL3O43909 919 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 MICAL2O94851 1124 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 ABLIM3O94929 683 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 GCNT3O95395 438 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 CYP11A1P05108 521 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 IDEP14735 1019 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 LIG1P18858 919 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 CLCNKBP51801 687 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 SOX4Q06945 474 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 DHX8Q14562 1220 aaKnown RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 KCNB1Q14721 858 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 COBLL1Q53SF7 1204 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 FOXR2Q6PJQ5 311 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 CCDC149Q6ZUS6 474 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 RBM23Q86U06 439 aaKnown RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 ZDHHC14Q8IZN3 488 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 LRRC52Q8N7C0 313 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 PDILTQ8N807 584 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 ZNF461Q8TAF7 563 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 CACTINQ8WUQ7 758 aaKnown RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 POMGNT1Q8WZA1 660 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 STAMQ92783 540 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 DHX58Q96C10 678 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 TIGD1Q96MW7 591 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 CLSTN3Q9BQT9 956 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 IGFLR1Q9H665 355 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 POLD4Q9HCU8 107 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 FBXW11Q9UKB1 542 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 BARX2Q9UMQ3 279 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-203ENST00000428014 VWA8A3KMH1 1905 aa9.92□□□□□ -0.82
SMC1A-203ENST00000428014 CASTOR2A6NHX0 329 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 OR6C75A6NL08 312 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 PER2O15055 1255 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 GPR37L1O60883 481 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 ZMYND10O75800 440 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 RHOBTB3O94955 611 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 CXCL8P10145 99 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 IL9P15248 144 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 PFKFB1P16118 471 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 SYKP43405 635 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 AP3M2P53677 418 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 ASIC1P78348 528 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 TMEM132DQ14C87 1099 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 PSMD5Q16401 504 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 ZC2HC1CQ53FD0 456 aaPredicted RBP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 RTP2Q5QGT7 225 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 FAM171A1Q5VUB5 890 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 CRELD2Q6UXH1 353 aaPredicted RBP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 DPH6Q7L8W6 267 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 ZBTB33Q86T24 672 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 LEMD2Q8NC56 503 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 PTCD2Q8WV60 388 aaKnown RBP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 CCDC47Q96A33 483 aaKnown RBP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 CEP295NLQ96MC4 621 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 PAAF1Q9BRP4 392 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 ZHX3Q9H4I2 956 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC1A-203ENST00000428014 NUB1Q9Y5A7 615 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 PCDHGC5Q9Y5F6 944 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
SMC1A-203ENST00000428014 TCF20Q9UGU0 1960 aaKnown RBP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ZNF233A6NK53 670 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 LACTBL1A8MY62 500 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ANKRD63C9JTQ0 380 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 PDXKO00764 312 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 TGM5O43548 720 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 KLRC4O43908 158 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 STAU1O95793 577 aaKnown RBP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ATF2P15336 505 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 PPP1R2P41236 205 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 CLDN10P78369 228 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 KNOP1Q1ED39 458 aaKnown RBP9.9□□□□□ -0.82
SMC1A-203ENST00000428014 SMYD5Q6GMV2 418 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 ZNF280DQ6N043 979 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 OTOP3Q7RTS5 596 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 TAS1R1Q7RTX1 841 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 BMP8AQ7Z5Y6 402 aa9.9□□□□□ -0.82
SMC1A-203ENST00000428014 TCEAL8Q8IYN2 117 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms