RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 C1orf112Q9NSG2 853 aa9.14□□□□□ -0.95
SH3D19-204ENST00000427414 C2CD2Q9Y426 696 aa9.14□□□□□ -0.95
SH3D19-204ENST00000427414 SQORQ9Y6N5 450 aa9.14□□□□□ -0.95
SH3D19-204ENST00000427414 A0A1B0GUA9 196 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 CHUKO15111 745 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SEPT4O43236 478 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 KIF1CO43896 1103 aaKnown RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 H2AFZP0C0S5 128 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 MYBL1P10243 752 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 ACTN1P12814 892 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 CXCR5P32302 372 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 LSP1P33241 339 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 GRM5P41594 1212 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 GCLMP48507 274 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 GUCY1A3Q02108 690 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 ALKBH5Q6P6C2 394 aaKnown RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 H2AFVQ71UI9 128 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 KIAA0319LQ8IZA0 1049 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 VCPIP1Q96JH7 1222 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 AGPAT1Q99943 283 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SH2D3AQ9BRG2 576 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 ADPGKQ9BRR6 497 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 MTG1Q9BT17 334 aaPredicted RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 STIM2Q9P246 746 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 ATXN2Q99700 1313 aaKnown RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 ANKRD62A6NC57 917 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SMIM10L2AP0DMW4 78 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SMIM10L2BP0DMW5 78 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SOX10P56693 466 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 NAA35Q5VZE5 725 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 NFRKBQ6P4R8 1299 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 EP400NLQ6ZTU2 488 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SLFN11Q7Z7L1 901 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 TRIM50Q86XT4 487 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 RNPC3Q96LT9 517 aaKnown RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 IMPG2Q9BZV3 1241 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 HAPLN2Q9GZV7 340 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 EPN3Q9H201 632 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 UBE2TQ9NPD8 197 aaPredicted RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 SMARCAL1Q9NZC9 954 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 FLRT1Q9NZU1 646 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 ABT1Q9ULW3 272 aaKnown RBP9.13□□□□□ -0.95
SH3D19-204ENST00000427414 PCDHB2Q9Y5E7 798 aa9.13□□□□□ -0.95
SH3D19-204ENST00000427414 A0A087X0T9 212 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 RTN2O75298 545 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 FAM228BP0C875 321 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 TNFAIP3P21580 790 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 MARK3P27448 753 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 PAFAH1B1P43034 410 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 CRYBB1P53674 252 aaPredicted RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 NAP1L1P55209 391 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 NLRP11P59045 1033 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 CFAP58Q5T655 872 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 UBR7Q8N806 425 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 OLIG1Q8TAK6 271 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 ZNF516Q92618 1163 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 ANKRD36BP1Q96IX9 119 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 RPF1Q9H9Y2 349 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 CYP3A43Q9HB55 503 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 KLC4Q9NSK0 619 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 GRID2IPA4D2P6 1211 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 TISP43B9A030 160 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 DYNC1LI2O43237 492 aaPredicted RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 GPR32O75388 356 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 MOCS3O95396 460 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 ASS1P00966 412 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 TNNC2P02585 160 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 IBSPP21815 317 aaPredicted RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 PURAQ00577 322 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 CDR2Q01850 454 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 IFT88Q13099 833 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 DRP2Q13474 957 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 FSCN1Q16658 493 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 DEFB115Q30KQ5 88 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 C8orf74Q6P047 294 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 ZNF473Q8WTR7 871 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 OSBPL9Q96SU4 736 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 ZNF518BQ9C0D4 1074 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 DNAI2Q9GZS0 605 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 IKZF4Q9H2S9 585 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 EHD2Q9NZN4 543 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 NOCTQ9UK39 431 aaKnown RBP9.12□□□□□ -0.95
SH3D19-204ENST00000427414 CAPN6Q9Y6Q1 641 aa9.12□□□□□ -0.95
SH3D19-204ENST00000427414 SCN10AQ9Y5Y9 1956 aa9.11□□□□□ -0.95
SH3D19-204ENST00000427414 PDCD11Q14690 1871 aaKnown RBP9.11□□□□□ -0.95
SH3D19-204ENST00000427414 C17orf102A2RUQ5 167 aa9.11□□□□□ -0.95
SH3D19-204ENST00000427414 GOLGA8IPA6NC78 632 aa9.11□□□□□ -0.95
SH3D19-204ENST00000427414 GOLGA8JA6NMD2 632 aa9.11□□□□□ -0.95
SH3D19-204ENST00000427414 FOXN3O00409 490 aaPredicted RBP9.11□□□□□ -0.95
SH3D19-204ENST00000427414 DDX3XO00571 662 aaKnown RBP eCLIP9.11□□□□□ -0.95
SH3D19-204ENST00000427414 HLA-DRAP01903 254 aa9.11□□□□□ -0.95
SH3D19-204ENST00000427414 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
SH3D19-204ENST00000427414 PLEKP08567 350 aaPredicted RBP9.11□□□□□ -0.95
SH3D19-204ENST00000427414 SRGAP2CP0DJJ0 459 aa9.11□□□□□ -0.95
SH3D19-204ENST00000427414 TNNI1P19237 187 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms