RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 P4HBP07237 508 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 BRD2P25440 801 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 CRYMQ14894 314 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ANGPT1Q15389 498 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ZNF677Q86XU0 584 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 RNF135Q8IUD6 432 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 CNDP1Q96KN2 507 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 KRT84Q9NSB2 600 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 DTNAQ9Y4J8 743 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 DLGAP3O95886 979 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 COPAP53621 1224 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 PDK1Q15118 436 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 NUP93Q8N1F7 819 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 ZNF473Q8WTR7 871 aaKnown RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 RBAKQ9NYW8 714 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 SPACA6W5XKT8 324 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 hCG_2014768A0A024R1R8 64 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 PDZK1P1A8MUH7 402 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 BFSP2Q13515 415 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 IFNA14P01570 189 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 CACHD1Q5VU97 1274 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 NSL1Q96IY1 281 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 ZBED2Q9BTP6 218 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 CLEC4MQ9H2X3 399 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 CATSPERBQ9H7T0 1116 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 C20orf96Q9NUD7 363 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 UBE3AQ05086 875 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 SFR1Q86XK3 245 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 COA7Q96BR5 231 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 POTEFA5A3E0 1075 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 TRIM49P0CI25 452 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 TRIM49CP0CI26 452 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 ADORA1P30542 326 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 CNTN1Q12860 1018 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 HIST2H2ACQ16777 129 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 HIST2H2AA3Q6FI13 130 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 PCDHA6Q9UN73 950 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 PCDHA8Q9Y5H6 950 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
PTPN13-203ENST00000427191 RBM15Q96T37 977 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-203ENST00000427191 CENPXA8MT69 81 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 UBXN2AP68543 259 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 ITIH4Q14624 930 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 TRIP10Q15642 601 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 FAM196AQ6ZSG2 479 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 FAM45AQ8TCE6 357 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 RNF25Q96BH1 459 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 C18orf8Q96DM3 657 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 UBA2Q9UBT2 640 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 SHCBP1Q8NEM2 672 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 SNRPAP09012 282 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 PRCPP42785 496 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 SFSWAPQ12872 951 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 MAGED4Q96JG8 741 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 CYP4Z1Q86W10 505 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 CCNJLQ8IV13 435 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 DDX47Q9H0S4 455 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 CPSF1Q10570 1443 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 CRKLP46109 303 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 TBL3Q12788 808 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 SLC18A3Q16572 532 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 KYNUQ16719 465 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 ACCSLQ4AC99 568 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 OLFML2BQ68BL8 750 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 MTERF3Q96E29 417 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 RMND5BQ96G75 393 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 FAM213AQ9BRX8 229 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 RMND5AQ9H871 391 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 XPO7Q9UIA9 1087 aaKnown RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 LOC102724428A0A0B4J2F2 783 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 SRGAP2O75044 1071 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 CHN1P15882 459 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 SIK1P57059 783 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 ST8SIA6P61647 398 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 ZNF589Q86UQ0 364 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-203ENST00000427191 RFWD2Q8NHY2 731 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 AGPAT1Q99943 283 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 RSAD1Q9HA92 442 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 PKP3Q9Y446 797 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 NME3Q13232 169 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 MICALL2Q8IY33 904 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 ERAP1Q9NZ08 941 aa15.1■□□□□ 0.01
PTPN13-203ENST00000427191 BIRC5O15392 142 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 ATP1A3P13637 1013 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 ENO3P13929 434 aaPredicted RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 CCT8P50990 548 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 FAM83EQ2M2I3 478 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 CYFIP1Q7L576 1253 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 GEMIN8Q9NWZ8 242 aaKnown RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 GUCA1AP43080 201 aaPredicted RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 STKLD1Q8NE28 680 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms