RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 SLC25A41Q8N5S1 370 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 SPATA4Q8NEY3 305 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 GIPC2Q8TF65 315 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 MED15Q96RN5 788 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 NT5C1AQ9BXI3 368 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 UPF3AQ9H1J1 476 aaKnown RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 METTL5Q9NRN9 209 aaKnown RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 TMEM247A6NEH6 219 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 FAM187AA6NFU0 413 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 DDTLA6NHG4 134 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 TADA3O75528 432 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 IL18RAPO95256 599 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 ARP10275 920 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 FXR2P51116 673 aaKnown RBP eCLIP8.34□□□□□ -1.072e-8■■■□□ 16.9
CTNND1-207ENST00000426142 PPP2R2AP63151 447 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 NBPF12Q5TAG4 269 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 TTC23LQ6PF05 361 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 GOLPH3Q9H4A6 298 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 CASS4Q9NQ75 786 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 VTNP04004 478 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 GNL1P36915 607 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 TAF11Q15544 211 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 NOTUMQ6P988 496 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 C3orf67Q6ZVT6 689 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 FBXO41Q8TF61 875 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 AKT1S1Q96B36 256 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 HPDLQ96IR7 371 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 CPB2Q96IY4 423 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 TMEM8AQ9HCN3 771 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 LSM7Q9UK45 103 aaKnown RBP8.34□□□□□ -1.07
CTNND1-207ENST00000426142 TBX20Q9UMR3 447 aa8.34□□□□□ -1.07
CTNND1-207ENST00000426142 YY1P25490 414 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 CLCN3P51790 818 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 NR1I3Q14994 352 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.08
CTNND1-207ENST00000426142 RFX8Q6ZV50 586 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 PGBD3Q8N328 593 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 EFHBQ8N7U6 833 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 BTBD6Q96KE9 485 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 DDX50Q9BQ39 737 aaKnown RBP8.34□□□□□ -1.08
CTNND1-207ENST00000426142 CYP4F11Q9HBI6 524 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 ZFATQ9P243 1243 aa8.34□□□□□ -1.08
CTNND1-207ENST00000426142 INO80Q9ULG1 1556 aaPredicted RBP8.34□□□□□ -1.08
CTNND1-207ENST00000426142 MED24O75448 989 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 E2F6O75461 281 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ALDH1A1P00352 501 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 EPHX2P34913 555 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ARHGDIAP52565 204 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 VCPP55072 806 aaKnown RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 PPP4CP60510 307 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 FSCBQ5H9T9 825 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ATL2Q8NHH9 583 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 GTF3C2Q8WUA4 911 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 RTFDC1Q9BY42 306 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 RAB6BQ9NRW1 208 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 PRMT7Q9NVM4 692 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ABI2Q9NYB9 513 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 AIPL1Q9NZN9 384 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 CPA4Q9UI42 421 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 FZD1Q9UP38 647 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 LUC7L3O95232 432 aaKnown RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 NCAM1P13591 858 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 CASP4P49662 377 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 TADA2BQ86TJ2 420 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 SLC38A7Q9NVC3 462 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 XPO7Q9UIA9 1087 aaKnown RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ANGPTL2Q9UKU9 493 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 PITPNM2Q9BZ72 1349 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 EIF3DO15371 548 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 SERPIND1P05546 499 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 TROAPQ12815 778 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 NR1H3Q13133 447 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 DHX34Q14147 1143 aaKnown RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 MORF4L2Q15014 288 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 MDH1BQ5I0G3 518 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 RNF180Q86T96 592 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ASAP3Q8TDY4 903 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 SH3TC2Q8TF17 1288 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 DCUN1D1Q96GG9 259 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 TRIM15Q9C019 465 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ADA2Q9NZK5 511 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 NAGPAQ9UK23 515 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 SNX12Q9UMY4 172 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 C3orf70A6NLC5 250 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-207ENST00000426142 RGL2O15211 777 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 KCNA2P16389 499 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 GUCY2CP25092 1073 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 BACE1P56817 501 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 FBXW4P57775 412 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ST8SIA6P61647 398 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 KAZALD1Q96I82 304 aa8.33□□□□□ -1.08
CTNND1-207ENST00000426142 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms