RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 SNX12Q9UMY4 172 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 GRID2IPA4D2P6 1211 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 EFCAB8A8MWE9 144 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 TADA3O75528 432 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 PALMO75781 387 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 ATICP31939 592 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 ASPAP45381 313 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 NAP1L1P55209 391 aaKnown RBP16.29■□□□□ 0.2
ACTB-204ENST00000425660 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
ACTB-204ENST00000425660 TMEM132DQ14C87 1099 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 TRIP12Q14669 1992 aaPredicted RBP16.28■□□□□ 0.2
ACTB-204ENST00000425660 TMCO5BA8MYB1 307 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 CABYRO75952 493 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
ACTB-204ENST00000425660 FTLP02792 175 aaPredicted RBP16.28■□□□□ 0.2
ACTB-204ENST00000425660 HADHBP55084 474 aaKnown RBP16.28■□□□□ 0.2
ACTB-204ENST00000425660 PRMT2P55345 433 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 CEP112Q8N8E3 955 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 MNS1Q8NEH6 495 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 TPCN2Q8NHX9 752 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
ACTB-204ENST00000425660 SNX27Q96L92 541 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 BCO2Q9BYV7 579 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 THAP2Q9H0W7 228 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 ITGA11Q9UKX5 1188 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 PIN4Q9Y237 131 aaKnown RBP16.28■□□□□ 0.2
ACTB-204ENST00000425660 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
ACTB-204ENST00000425660 M0QZ92 97 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 FKTNO75072 461 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 ITGB3P05106 788 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 UNGP13051 313 aaPredicted RBP16.27■□□□□ 0.2
ACTB-204ENST00000425660 ARHGEF6Q15052 776 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 ZBTB6Q15916 424 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 UBXN11Q5T124 520 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 RNF180Q86T96 592 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
ACTB-204ENST00000425660 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 CISHQ9NSE2 258 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 SNTG2Q9NY99 539 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 CNTN3Q9P232 1028 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.2
ACTB-204ENST00000425660 TCP1P17987 556 aaKnown RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 CLEC16AQ2KHT3 1053 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 FAM228AQ86W67 206 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 RHOT2Q8IXI1 618 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 SLC35G2Q8TBE7 412 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 ZNF296Q8WUU4 475 aaPredicted RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 TSC1Q92574 1164 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 WNT8BQ93098 351 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 TSPAN18Q96SJ8 248 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 TRIM6Q9C030 488 aaPredicted RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 FAM124BQ9H5Z6 455 aaPredicted RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 CDY2AQ9Y6F7 541 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 CYP1A1P04798 512 aaPredicted RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 KRT19P08727 400 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 ABCB4P21439 1286 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 GNA15P30679 374 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 NOP2P46087 812 aaKnown RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 YARSP54577 528 aaKnown RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 GPC5P78333 572 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 MGAT3Q09327 533 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 TRIM72Q6ZMU5 477 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
ACTB-204ENST00000425660 NOC2LQ9Y3T9 749 aaKnown RBP16.26■□□□□ 0.19
ACTB-204ENST00000425660 RALGAPA2Q2PPJ7 1873 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 MOXD2PA6NHM9 499 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 MTA2O94776 668 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 CHRNA1P02708 482 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 TFRCP02786 760 aaKnown RBP16.25■□□□□ 0.19
ACTB-204ENST00000425660 INHAP05111 366 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 ACLYP53396 1101 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 YWHAEP62258 255 aaKnown RBP16.25■□□□□ 0.19
ACTB-204ENST00000425660 RBP5P82980 135 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
ACTB-204ENST00000425660 NAA30Q147X3 362 aaPredicted RBP16.25■□□□□ 0.19
ACTB-204ENST00000425660 WDR72Q3MJ13 1102 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 ZNF667Q5HYK9 610 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 LHX8Q68G74 356 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 ACAD10Q6JQN1 1059 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 RSRC2Q7L4I2 434 aaKnown RBP16.25■□□□□ 0.19
ACTB-204ENST00000425660 SYCE1Q8N0S2 351 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 KIF12Q96FN5 646 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 ZMAT2Q96NC0 199 aaKnown RBP16.25■□□□□ 0.19
ACTB-204ENST00000425660 OSGEPQ9NPF4 335 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 DPP3Q9NY33 737 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 HYOU1Q9Y4L1 999 aa16.25■□□□□ 0.19
ACTB-204ENST00000425660 HES2Q9Y543 173 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms