RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TMEM51Q9NW97 253 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 MAFO75444 373 aaPredicted RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 MTA2O94776 668 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 ERLIN2O94905 339 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 TMEM192Q8IY95 271 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 CCDC114Q96M63 670 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 GRHL1Q9NZI5 618 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 ASIC3Q9UHC3 531 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 R3HDM2Q9Y2K5 976 aaKnown RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 TXNP10599 105 aaKnown RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 TCF4P15884 667 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 EDNRBP24530 442 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 CTNNA2P26232 953 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 RFC5P40937 340 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 TAS2R40P59535 323 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 MAGOHP61326 146 aaKnown RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 RPL7AP62424 266 aaKnown RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 KAZNQ674X7 775 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 SEC14L1Q92503 715 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
UBR4-207ENST00000425413 OPTNQ96CV9 577 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 PWWP2AQ96N64 755 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 MMP19Q99542 508 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 GPR20Q99678 358 aa12.33□□□□□ -0.44
UBR4-207ENST00000425413 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 SOCS7O14512 581 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 MSCO60682 206 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 ZC3H11AO75152 810 aaKnown RBP eCLIP12.32□□□□□ -0.44
UBR4-207ENST00000425413 LDHAP00338 332 aaKnown RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 PMS2P54278 862 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 NOMO3P69849 1222 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 MTMR3Q13615 1198 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 SIX1Q15475 284 aaPredicted RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 MAPK6Q16659 721 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 CD302Q8IX05 232 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 ABRAQ8N0Z2 381 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 CDCA5Q96FF9 252 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 FGD4Q96M96 766 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 WDR81Q562E7 1941 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 CAND2O75155 1236 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 RALAP11233 206 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 LSP1P33241 339 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 RAP1GAPP47736 663 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 BPIFB4P59827 614 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 CLDN10P78369 228 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 TRPC3Q13507 836 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 SLC29A2Q14542 456 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 CYP4A22Q5TCH4 519 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 MON1BQ7L1V2 547 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 DPH6Q7L8W6 267 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 PRRT2Q7Z6L0 340 aaPredicted RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 C1orf131Q8NDD1 294 aaKnown RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 MDM1Q8TC05 714 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
UBR4-207ENST00000425413 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
UBR4-207ENST00000425413 HMGB1P1B2RPK0 211 aaPredicted RBP12.31□□□□□ -0.44
UBR4-207ENST00000425413 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
UBR4-207ENST00000425413 TOM1L1O75674 476 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ECEL1O95672 775 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 KRT17Q04695 432 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 PLCB4Q15147 1175 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ZNF568Q3ZCX4 644 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 CELF3Q5SZQ8 465 aaKnown RBP12.31□□□□□ -0.44
UBR4-207ENST00000425413 KDM7AQ6ZMT4 941 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ZBTB8OSQ8IWT0 167 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ZNF606Q8WXB4 792 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.31□□□□□ -0.444e-8■■■■■ 36.3
UBR4-207ENST00000425413 RNPEPQ9H4A4 650 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ZBTB42B2RXF5 422 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 E7EVH7 732 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 CD19P15391 556 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 TCEAL1Q15170 157 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 LIN9Q5TKA1 542 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 LRIG3Q6UXM1 1119 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ANKS1BQ7Z6G8 1248 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 ACO2Q99798 780 aaKnown RBP12.31□□□□□ -0.44
UBR4-207ENST00000425413 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 POLIQ9UNA4 740 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 LCTP09848 1927 aa12.31□□□□□ -0.44
UBR4-207ENST00000425413 PPFIA2O75334 1257 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 PIGRP01833 764 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 CYP1A1P04798 512 aaPredicted RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 CXCL8P10145 99 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 KRT10P13645 584 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms