RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 TWF1Q12792 350 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 SAFBQ15424 915 aaKnown RBP eCLIP12.84□□□□□ -0.35
PLOD3-204ENST00000424135 SLC10A6Q3KNW5 377 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 MAP4K3Q8IVH8 894 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 CNTNAP3BQ96NU0 1288 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 MMTAG2Q9BU76 263 aaKnown RBP12.84□□□□□ -0.35
PLOD3-204ENST00000424135 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
PLOD3-204ENST00000424135 CNTNAP3Q9BZ76 1288 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 BRD9Q9H8M2 597 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
PLOD3-204ENST00000424135 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 PCDHB6Q9Y5E3 794 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 TIMM13Q9Y5L4 95 aaPredicted RBP12.84□□□□□ -0.35
PLOD3-204ENST00000424135 PHLPP2Q6ZVD8 1323 aa12.84□□□□□ -0.35
PLOD3-204ENST00000424135 KMT2BQ9UMN6 2715 aaPredicted RBP12.83□□□□□ -0.35
PLOD3-204ENST00000424135 ACACBO00763 2458 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 DCDC2BA2VCK2 349 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 SYN3O14994 580 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 OR4Q2P0C623 313 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 MYL4P12829 197 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 SOX9P48436 509 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 GUCY2FP51841 1108 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 CDR1P51861 262 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 YARSP54577 528 aaKnown RBP12.83□□□□□ -0.36
PLOD3-204ENST00000424135 SATB1Q01826 763 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 TEAD2Q15562 447 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 RINT1Q6NUQ1 792 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 C1orf186Q6ZWK4 172 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-204ENST00000424135 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 SHKBP1Q8TBC3 707 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 SMARCD2Q92925 531 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 SUSD3Q96L08 255 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 ACAP3Q96P50 834 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 LRRC3BQ96PB8 259 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 NELL2Q99435 816 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 TRMT61BQ9BVS5 477 aaKnown RBP12.83□□□□□ -0.36
PLOD3-204ENST00000424135 MRPL4Q9BYD3 311 aaKnown RBP12.83□□□□□ -0.36
PLOD3-204ENST00000424135 CHRDQ9H2X0 955 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 FOXP1Q9H334 677 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-204ENST00000424135 TMEM134Q9H6X4 195 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 LMAN1LQ9HAT1 526 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
PLOD3-204ENST00000424135 ARNTLO00327 626 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 KRT37O76014 449 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 MCF2P10911 925 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 MUTP22033 750 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 MAGEA9P43362 315 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 SRSF5Q13243 272 aaKnown RBP12.82□□□□□ -0.36
PLOD3-204ENST00000424135 PTGDRQ13258 359 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 STXBP5Q5T5C0 1151 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 ZSCAN18Q8TBC5 510 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-204ENST00000424135 DDX12PQ92771 950 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 PGLYRP2Q96PD5 576 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 TCHPQ9BT92 498 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 LRRC3Q9BY71 257 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 DNAJC25Q9H1X3 360 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-204ENST00000424135 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
PLOD3-204ENST00000424135 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 NUB1Q9Y5A7 615 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 PIAS3Q9Y6X2 628 aa12.82□□□□□ -0.36
PLOD3-204ENST00000424135 NPHP3-ACAD11A0A0J9YXS1 232 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 HEPACAM2A8MVW5 462 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 H7C4K7 107 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 PPEF2O14830 753 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 SOAT2O75908 522 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 CXCL8P10145 99 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 CHRNB1P11230 501 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 PSMC3P17980 439 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 RPL9P32969 192 aaKnown RBP12.81□□□□□ -0.36
PLOD3-204ENST00000424135 MCM4P33991 863 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 EPHA5P54756 1037 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 SPEM2Q0P670 501 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 DMP1Q13316 513 aaPredicted RBP12.81□□□□□ -0.36
PLOD3-204ENST00000424135 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TMC8Q8IU68 726 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TMEM161BQ8NDZ6 487 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TTC8Q8TAM2 541 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 FAM3CQ92520 227 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 PNMA5Q96PV4 448 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 PLIN2Q99541 437 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 SLC38A7Q9NVC3 462 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 AFF4Q9UHB7 1163 aaKnown RBP12.81□□□□□ -0.36
PLOD3-204ENST00000424135 USP18Q9UMW8 372 aa12.81□□□□□ -0.36
PLOD3-204ENST00000424135 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms