RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 PDE4DIPQ5VU43 2346 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 A0A087WZ62 844 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 PTENP60484 403 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 KRT17Q04695 432 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 ITIH3Q06033 890 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 TRPC3Q13507 836 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 NFIL3Q16649 462 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
PTPRN-204ENST00000423636 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 FDXACB1Q9BRP7 624 aaPredicted RBP12.71□□□□□ -0.37
PTPRN-204ENST00000423636 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.37
PTPRN-204ENST00000423636 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
PTPRN-204ENST00000423636 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.38
PTPRN-204ENST00000423636 KIAA0391O15091 583 aaKnown RBP12.71□□□□□ -0.38
PTPRN-204ENST00000423636 GJA5P36382 358 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 POU5F1Q01860 360 aaKnown RBP12.71□□□□□ -0.38
PTPRN-204ENST00000423636 TAF5Q15542 800 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 CDO1Q16878 200 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 ZNF606Q8WXB4 792 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 MMP19Q99542 508 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 CDH23Q9H251 3354 aa12.71□□□□□ -0.38
PTPRN-204ENST00000423636 BTNL10A8MVZ5 291 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 RWDD2BP57060 319 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 KYNUQ16719 465 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 GPAT2Q6NUI2 795 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 DCUN1D2Q6PH85 259 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 CARD9Q9H257 536 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 GOLGA8KD6RF30 607 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 NFICP08651 508 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 ADCY8P40145 1251 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 ALCAMQ13740 583 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 ANKRD42Q8N9B4 389 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 SH3GL2Q99962 352 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 NRBP2Q9NSY0 501 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 CNMDO75829 334 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 LSP1P33241 339 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 ARL2P36404 184 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
PTPRN-204ENST00000423636 RABGGTBP53611 331 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 OGDHQ02218 1023 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 GAD2Q05329 585 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 QPCTQ16769 361 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 SH3PXD2AQ5TCZ1 1133 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 ALS2CLQ60I27 953 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 C12orf29Q8N999 325 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 WHAMMQ8TF30 809 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 AFG1LQ8WV93 481 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 FGD4Q96M96 766 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 TWNKQ96RR1 684 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 IVNS1ABPQ9Y6Y0 642 aa12.7□□□□□ -0.38
PTPRN-204ENST00000423636 A0A0B4J269 797 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 VGLL3A8MV65 326 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 H0YGN5 161 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 SOCS7O14512 581 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 ADCY3O60266 1144 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 RGS7P49802 495 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 PMS2P54278 862 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 MAPK6Q16659 721 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 GPR20Q99678 358 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 VPS33BQ9H267 617 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 GRHL1Q9NZI5 618 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 NFS1Q9Y697 457 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 PHIPQ8WWQ0 1821 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 CCDC188H7C350 402 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 UNGP13051 313 aaPredicted RBP12.69□□□□□ -0.38
PTPRN-204ENST00000423636 INSRRP14616 1297 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 ACO1P21399 889 aaKnown RBP12.69□□□□□ -0.38
PTPRN-204ENST00000423636 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
PTPRN-204ENST00000423636 PTGIRP43119 386 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 KIZQ2M2Z5 673 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 C12orf56Q8IXR9 622 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 SMYD3Q9H7B4 428 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 INTUQ9ULD6 942 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.69□□□□□ -0.38
PTPRN-204ENST00000423636 CNTNAP2Q9UHC6 1331 aa12.69□□□□□ -0.38
PTPRN-204ENST00000423636 ZBTB42B2RXF5 422 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 GPR25O00155 361 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 EIF3HO15372 352 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPRN-204ENST00000423636 MSCO60682 206 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 PHF2O75151 1096 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 ITGB3P05106 788 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 CLTAP09496 248 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
PTPRN-204ENST00000423636 PSMD6Q15008 389 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms