RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SRSF5Q13243 272 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 LRRC32Q14392 662 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 NT5DC1Q5TFE4 455 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 HS6ST3Q8IZP7 471 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 ELMOD1Q8N336 334 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 ZSCAN18Q8TBC5 510 aaPredicted RBP18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 GPR88Q9GZN0 384 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 CEP72Q9P209 647 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 FBXL5Q9UKA1 691 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 RALGAPA1Q6GYQ0 2036 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 CNOT1A5YKK6 2376 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 TICRRQ7Z2Z1 1910 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 EFNA5P52803 228 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 ARPP19P56211 112 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 PPP2R5AQ15172 486 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 N4BP2L1Q5TBK1 243 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 ATF7IP2Q5U623 682 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 PADI6Q6TGC4 694 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 FAM160A2Q8N612 972 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 WASF1Q92558 559 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 POLR3CQ9BUI4 534 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 C8orf33Q9H7E9 229 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 SLC38A7Q9NVC3 462 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 AFF4Q9UHB7 1163 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 TNFSF13BQ9Y275 285 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 TRIP11Q15643 1979 aa18.38■□□□□ 0.53
CHCHD3-202ENST00000423635 NCANO14594 1321 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 HEPACAM2A8MVW5 462 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 PODXLO00592 558 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 CHADO15335 359 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 NEMFO60524 1076 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 MED24O75448 989 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 LIG1P18858 919 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 FCHO2Q0JRZ9 810 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 WDR44Q5JSH3 913 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 DGKKQ5KSL6 1271 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 IL31Q6EBC2 164 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 APBB1IPQ7Z5R6 666 aaPredicted RBP18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
CHCHD3-202ENST00000423635 WNT7AO00755 349 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 PFKFB2O60825 505 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 CTDNEP1O95476 244 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 GJA1P17302 382 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 RPL9P32969 192 aaKnown RBP18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 GRM5P41594 1212 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 YARSP54577 528 aaKnown RBP18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 TWF1Q12792 350 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 WDR5BQ86VZ2 330 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 CSGALNACT1Q8TDX6 532 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 ASAH2Q9NR71 780 aa18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 TOPORSQ9NS56 1045 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 RBM12Q9NTZ6 932 aaKnown RBP18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-202ENST00000423635 MYBPHLA2RUH7 354 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 ZNF806P0C7X5 589 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 MYL4P12829 197 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 FDPSP14324 419 aaKnown RBP18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 KCNE1P15382 129 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 TEAD2Q15562 447 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 CTXN3Q4LDR2 81 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 SYNPOQ8N3V7 929 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 RSPRY1Q96DX4 576 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 LOXL4Q96JB6 756 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 SUSD3Q96L08 255 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 KIFC3Q9BVG8 833 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 CCDC94Q9BW85 323 aaPredicted RBP18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 LRRC3Q9BY71 257 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 TMEM60Q9H2L4 133 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 PTPRHQ9HD43 1115 aa18.35■□□□□ 0.53
CHCHD3-202ENST00000423635 K7ERI5 159 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 DTNBO60941 627 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 RPA1P27694 616 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 HEATR6Q6AI08 1181 aaKnown RBP18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 TXNDC11Q6PKC3 985 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 Q6ZS52 159 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 CEP68Q76N32 757 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 RALGPS2Q86X27 583 aaPredicted RBP18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 YAF2Q8IY57 180 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 CEP120Q8N960 986 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 SHKBP1Q8TBC3 707 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 IFT74Q96LB3 600 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 C2orf42Q9NWW7 574 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 TPCN1Q9ULQ1 816 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 NUB1Q9Y5A7 615 aa18.34■□□□□ 0.53
CHCHD3-202ENST00000423635 ARHGEF35A5YM69 484 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 BTBD18B2RXH4 712 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 SPECC1L-ADORA2AF8WAN1 911 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 SOX9P48436 509 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 KPNA1P52294 538 aaPredicted RBP18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 AASDHQ4L235 1098 aaPredicted RBP18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 ZNF280DQ6N043 979 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 RNF19BQ6ZMZ0 732 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 APPL2Q8NEU8 664 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 DDX12PQ92771 950 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 KIFAP3Q92845 792 aa18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 ACO2Q99798 780 aaKnown RBP18.33■□□□□ 0.53
CHCHD3-202ENST00000423635 CDT1Q9H211 546 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms