RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 UBALD2Q8IYN6 164 aa23.81■■□□□ 1.4
TRAF4-204ENST00000422344 PYM1Q9BRP8 204 aaKnown RBP23.81■■□□□ 1.4
TRAF4-204ENST00000422344 ATP6V1DQ9Y5K8 247 aa23.81■■□□□ 1.4
TRAF4-204ENST00000422344 TISP43B9A030 160 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 CYP3A5P20815 502 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 ACOT2P49753 483 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 PDCD11Q14690 1871 aaKnown RBP23.8■■□□□ 1.4
TRAF4-204ENST00000422344 LIN9Q5TKA1 542 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 RESP18Q5W5W9 173 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 LILRA6Q6PI73 481 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 CYP26C1Q6V0L0 522 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 CCDC149Q6ZUS6 474 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 TDRD5Q8NAT2 981 aaKnown RBP23.8■■□□□ 1.4
TRAF4-204ENST00000422344 STRA6Q9BX79 667 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 TRIM9Q9C026 710 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 SMOC2Q9H3U7 446 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 PIDD1Q9HB75 910 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 MTRRQ9UBK8 725 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 STYXL1Q9Y6J8 313 aa23.8■■□□□ 1.4
TRAF4-204ENST00000422344 PTPRZ1P23471 2315 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-204ENST00000422344 SYN3O14994 580 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 RFPL2O75678 378 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 OR1D2P34982 312 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 CASP5P51878 434 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 BEST2Q8NFU1 509 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 SMG7Q92540 1137 aaKnown RBP23.79■■□□□ 1.4
TRAF4-204ENST00000422344 SPATA32Q96LK8 384 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 TMEM206Q9H813 350 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 ZDHHC7Q9NXF8 308 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 BACE2Q9Y5Z0 518 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 CDY1Q9Y6F8 540 aa23.79■■□□□ 1.4
TRAF4-204ENST00000422344 TULP1O00294 542 aaPredicted RBP23.78■■□□□ 1.4
TRAF4-204ENST00000422344 ASGR2P07307 311 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 LRPAP1P30533 357 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 KCNA1Q09470 495 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 ZBTB6Q15916 424 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 VARS2Q5ST30 1063 aaKnown RBP23.78■■□□□ 1.4
TRAF4-204ENST00000422344 JADE1Q6IE81 842 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 CEP57L1Q8IYX8 460 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 ACSF2Q96CM8 615 aaPredicted RBP23.78■■□□□ 1.4
TRAF4-204ENST00000422344 IKZF4Q9H2S9 585 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 FBXW11Q9UKB1 542 aa23.78■■□□□ 1.4
TRAF4-204ENST00000422344 VWA8A3KMH1 1905 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 MYO15AQ9UKN7 3530 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 H7C4K7 107 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 ADAM12O43184 909 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 GALR2O43603 387 aaPredicted RBP23.77■■□□□ 1.4
TRAF4-204ENST00000422344 ZMYND10O75800 440 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 ADRB2P07550 413 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 NUBP1P53384 320 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 RAB33AQ14088 237 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 TMEM132DQ14C87 1099 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 OTOP3Q7RTS5 596 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 APPL2Q8NEU8 664 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 SUSD3Q96L08 255 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 RHOBTB2Q9BYZ6 727 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 ASB7Q9H672 318 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 LIMD1Q9UGP4 676 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 KCNH3Q9ULD8 1083 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 USTQ9Y2C2 406 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 DERAQ9Y315 318 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 ZDHHC9Q9Y397 364 aa23.77■■□□□ 1.4
TRAF4-204ENST00000422344 PRPF6O94906 941 aaKnown RBP23.76■■□□□ 1.39
TRAF4-204ENST00000422344 POU5F1Q01860 360 aaKnown RBP23.76■■□□□ 1.39
TRAF4-204ENST00000422344 PPM1LQ5SGD2 360 aa23.76■■□□□ 1.39
TRAF4-204ENST00000422344 PLCD3Q8N3E9 789 aa23.76■■□□□ 1.39
TRAF4-204ENST00000422344 FEZF2Q8TBJ5 459 aa23.76■■□□□ 1.39
TRAF4-204ENST00000422344 LEO1Q8WVC0 666 aaPredicted RBP23.76■■□□□ 1.39
TRAF4-204ENST00000422344 C7orf25Q9BPX7 421 aa23.76■■□□□ 1.39
TRAF4-204ENST00000422344 FGFBP2Q9BYJ0 223 aa23.76■■□□□ 1.39
TRAF4-204ENST00000422344 PRKD2Q9BZL6 878 aa23.76■■□□□ 1.39
TRAF4-204ENST00000422344 RIF1Q5UIP0 2472 aaKnown RBP23.75■■□□□ 1.39
TRAF4-204ENST00000422344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-204ENST00000422344 LDHAP00338 332 aaKnown RBP23.75■■□□□ 1.39
TRAF4-204ENST00000422344 C8AP07357 584 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 NFICP08651 508 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 GARTP22102 1010 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 ADSSP30520 456 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 GUCY2FP51841 1108 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 SPATA1Q5VX52 437 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 CNNM4Q6P4Q7 775 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 DSTYKQ6XUX3 929 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 ZDHHC14Q8IZN3 488 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 TMEM105Q8N8V8 129 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 NOC3LQ8WTT2 800 aaKnown RBP23.75■■□□□ 1.39
TRAF4-204ENST00000422344 FAM213AQ9BRX8 229 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 PCDHB8Q9UN66 801 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 SPTBN4Q9H254 2564 aa23.75■■□□□ 1.39
TRAF4-204ENST00000422344 IL18RAPO95256 599 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 HNRNPA1P09651 372 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRAF4-204ENST00000422344 AFMP43652 599 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 ARPP19P56211 112 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 CTXN3Q4LDR2 81 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 FAM26FQ5R3K3 315 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 ZNF280DQ6N043 979 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 ARMCX5Q6P1M9 558 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 RSPO2Q6UXX9 243 aaPredicted RBP23.74■■□□□ 1.39
TRAF4-204ENST00000422344 UNC13DQ70J99 1090 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 HPS3Q969F9 1004 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 ZNF707Q96C28 371 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms