RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 KCND2Q9NZV8 630 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 ACADSP16219 412 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 MUTP22033 750 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 APOBEC3HQ6NTF7 200 aaKnown RBP22.56■■□□□ 1.2
USP48-205ENST00000421625 SLC30A9Q6PML9 568 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 PADI6Q6TGC4 694 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 OTOAQ7RTW8 1153 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 RELL1Q8IUW5 271 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 RIBC1Q8N443 379 aaPredicted RBP22.56■■□□□ 1.2
USP48-205ENST00000421625 CEP120Q8N960 986 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 HELQQ8TDG4 1101 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 CCDC127Q96BQ5 260 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 DDTLA6NHG4 134 aaPredicted RBP22.55■■□□□ 1.2
USP48-205ENST00000421625 DDX39AO00148 427 aaKnown RBP22.55■■□□□ 1.2
USP48-205ENST00000421625 ARP10275 920 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 CA4P22748 312 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 CLEC16AQ2KHT3 1053 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 MUM1Q2TAK8 710 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 KHDC1Q4VXA5 237 aaKnown RBP22.55■■□□□ 1.2
USP48-205ENST00000421625 CMPK2Q5EBM0 449 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 PCNX4Q63HM2 1172 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 RGS9BPQ6ZS82 235 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 ANKS1BQ7Z6G8 1248 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 CCDC89Q8N998 374 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 GLIS1Q8NBF1 620 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 RNF217Q8TC41 542 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 UCMAQ8WVF2 138 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 ZFP69BQ9UJL9 534 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 PCDHAC2Q9Y5I4 1007 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 SNUPNO95149 360 aaKnown RBP22.55■■□□□ 1.2
USP48-205ENST00000421625 APBA3O96018 575 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 ABHD2P08910 425 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 ADSSP30520 456 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 CENPCQ03188 943 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 KLC1Q07866 573 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 TSNAXIP1Q2TAA8 658 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 NLRP9Q7RTR0 991 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 CBWD2Q8IUF1 395 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 ZCCHC9Q8N567 271 aaKnown RBP22.55■■□□□ 1.2
USP48-205ENST00000421625 ACCSQ96QU6 501 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 SH2D3AQ9BRG2 576 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 NPHS2Q9NP85 383 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 UBN1Q9NPG3 1134 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 NMRK1Q9NWW6 199 aa22.55■■□□□ 1.2
USP48-205ENST00000421625 A0A1W2PPM1 405 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 FDX1P10109 184 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 GJC1P36383 396 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 GSTA5Q7RTV2 222 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 MTDHQ86UE4 582 aaKnown RBP22.54■■□□□ 1.2
USP48-205ENST00000421625 TEKT4Q8WW24 435 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 SMC6Q96SB8 1091 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 TMEM206Q9H813 350 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 TOPORSQ9NS56 1045 aaPredicted RBP22.54■■□□□ 1.2
USP48-205ENST00000421625 POLRMTO00411 1230 aaKnown RBP22.54■■□□□ 1.2
USP48-205ENST00000421625 KLRC2P26717 231 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 PTPN4P29074 926 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 RASSF2P50749 326 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 PLEKHG4Q58EX7 1191 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 CPA5Q8WXQ8 436 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 CFAP57Q96MR6 1250 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 ZNF577Q9BSK1 485 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 PAPOLBQ9NRJ5 636 aaKnown RBP22.54■■□□□ 1.2
USP48-205ENST00000421625 UBR3Q6ZT12 1888 aa22.54■■□□□ 1.2
USP48-205ENST00000421625 TRAFD1O14545 582 aaPredicted RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 PAPOLAP51003 745 aaKnown RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 APBB1IPQ7Z5R6 666 aaPredicted RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 RBBP8NLQ8NC74 664 aaPredicted RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 BBOF1Q8ND07 529 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 CYLDQ9NQC7 956 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 DLGAP2Q9P1A6 1054 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.53■■□□□ 1.2
USP48-205ENST00000421625 PIK3CDO00329 1044 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 NPTXRO95502 500 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 ZSCAN5DPP0CG00 497 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 KRT5P13647 590 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 PECAM1P16284 738 aaPredicted RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 SP100P23497 879 aaPredicted RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 MARK3P27448 753 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 RFC5P40937 340 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 CCNG2Q16589 344 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 CRY2Q49AN0 593 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 DSTYKQ6XUX3 929 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 ZNF333Q96JL9 665 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 DCLRE1BQ9H816 532 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 SIPA1L1O43166 1804 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 NR1H3Q13133 447 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 LBRQ14739 615 aaKnown RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 HHATQ5VTY9 493 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 MCOLN2Q8IZK6 566 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 RBM17Q96I25 401 aaKnown RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 FHDC1Q9C0D6 1143 aaPredicted RBP22.53■■□□□ 1.2
USP48-205ENST00000421625 PKD2L1Q9P0L9 805 aa22.53■■□□□ 1.2
USP48-205ENST00000421625 ABLIM1O14639 778 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 NVLO15381 856 aaKnown RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 PLS3P13797 630 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 TAS2R40P59535 323 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 CTC1Q2NKJ3 1217 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 C4orf50Q6ZRC1 276 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 CLNKQ7Z7G1 428 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 TAS1R2Q8TE23 839 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms