RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GPR20Q99678 358 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 A0A0G2JLL6 359 aaPredicted RBP11.67□□□□□ -0.54
DDX56-203ENST00000421223 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 TLR3O15455 904 aaKnown RBP11.67□□□□□ -0.54
DDX56-203ENST00000421223 CLTAP09496 248 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 RAP1GAPP47736 663 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 CDR1P51861 262 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 SEC24CP53992 1094 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 TMC3Q7Z5M5 1100 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 PRRT2Q7Z6L0 340 aaPredicted RBP11.67□□□□□ -0.54
DDX56-203ENST00000421223 PRUNE1Q86TP1 453 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 TMEM192Q8IY95 271 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 C10orf67Q8IYJ2 551 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 ATP6V1G3Q96LB4 118 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 CGRRF1Q99675 332 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 SPON1Q9HCB6 807 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 PCDHA3Q9Y5H8 950 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 PMM2O15305 246 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 TOM1L1O75674 476 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 CDH8P55286 799 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 RPL7AP62424 266 aaKnown RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 POU5F1Q01860 360 aaKnown RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 ZNF844Q08AG5 666 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 UBAP2Q5T6F2 1119 aaKnown RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 CYP4A22Q5TCH4 519 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 DCUN1D2Q6PH85 259 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 C15orf39Q6ZRI6 1047 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 HAUS1Q96CS2 278 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 SLC10A4Q96EP9 437 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 CHST7Q9NS84 486 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 RNF19AQ9NV58 838 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 MROH7Q68CQ1 1323 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 NDUFAB1O14561 156 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 CNMDO75829 334 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 SHBGP04278 402 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 IVLP07476 585 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 TGFB3P10600 412 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 UNGP13051 313 aaPredicted RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 ATF7P17544 494 aaPredicted RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 OSBPP22059 807 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 CHRNA3P32297 505 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 PLCB4Q15147 1175 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 TARBP2Q15633 366 aaKnown RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 IER5Q5VY09 327 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 C1orf131Q8NDD1 294 aaKnown RBP11.66□□□□□ -0.54
DDX56-203ENST00000421223 MINDY3Q9H8M7 445 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
DDX56-203ENST00000421223 PIK3R2O00459 728 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 KIAA0391O15091 583 aaKnown RBP11.65□□□□□ -0.54
DDX56-203ENST00000421223 MSCO60682 206 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 VTNP04004 478 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ZNF286BP0CG31 522 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 CXCL8P10145 99 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 RALAP11233 206 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 MAGOHP61326 146 aaKnown RBP11.65□□□□□ -0.54
DDX56-203ENST00000421223 DUOXA2Q1HG44 320 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 DUPD1Q68J44 220 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ABRAQ8N0Z2 381 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 TAB3Q8N5C8 712 aaPredicted RBP11.65□□□□□ -0.54
DDX56-203ENST00000421223 TMEM174Q8WUU8 243 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 CPB2Q96IY4 423 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 SEMA4AQ9H3S1 761 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 TTC7AQ9ULT0 858 aaPredicted RBP11.65□□□□□ -0.54
DDX56-203ENST00000421223 POLIQ9UNA4 740 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX56-203ENST00000421223 KRT10P13645 584 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ACO1P21399 889 aaKnown RBP11.65□□□□□ -0.54
DDX56-203ENST00000421223 EPHX2P34913 555 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 TAS2R40P59535 323 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 CALCOCO2Q13137 446 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ZNF699Q32M78 642 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 WDR72Q3MJ13 1102 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ATF7IP2Q5U623 682 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 PWWP2AQ96N64 755 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 ACO2Q99798 780 aaKnown RBP11.65□□□□□ -0.54
DDX56-203ENST00000421223 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 CISHQ9NSE2 258 aa11.65□□□□□ -0.54
DDX56-203ENST00000421223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX56-203ENST00000421223 IGKV6D-21A0A0A0MT36 114 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 SOCS7O14512 581 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 TRIM66O15016 1216 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 OGTO15294 1046 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 ECEL1O95672 775 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 YBX3P16989 372 aaKnown RBP eCLIP11.65□□□□□ -0.55
DDX56-203ENST00000421223 EDNRBP24530 442 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 EFNA5P52803 228 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 PMS2P54278 862 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 DHX34Q14147 1143 aaKnown RBP11.65□□□□□ -0.55
DDX56-203ENST00000421223 SLC29A2Q14542 456 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 MREGQ8N565 214 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms