RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 DNAJB2P25686 324 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 GTF2H1P32780 548 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 BEX3Q00994 111 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ARHGEF7Q14155 803 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 PCBP1Q15365 356 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 SEC23AQ15436 765 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ZNF677Q86XU0 584 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 TMEM60Q9H2L4 133 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 TTI1O43156 1089 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 GHRP10912 638 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 IGFBP4P22692 258 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 RGS7P49802 495 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 CREMQ03060 361 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 A0A1W2PQC6 194 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 SNX2O60749 519 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 TOM1L1O75674 476 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 TOMM70O94826 608 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 PRAMEP78395 509 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 SLMAPQ14BN4 828 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 AMHR2Q16671 573 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 CELF3Q5SZQ8 465 aaKnown RBP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 MCUQ8NE86 351 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ALKBH8Q96BT7 664 aaKnown RBP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 MID2Q9UJV3 735 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 CKMP06732 381 aa11.33□□□□□ -0.59
PTCH1-206ENST00000421141 CERS5Q8N5B7 392 aa11.33□□□□□ -0.59
PTCH1-206ENST00000421141 KLRG1Q96E93 195 aa11.33□□□□□ -0.59
PTCH1-206ENST00000421141 RSPH14Q9UHP6 348 aa11.33□□□□□ -0.59
PTCH1-206ENST00000421141 DDX60Q8IY21 1712 aaKnown RBP11.33□□□□□ -0.59
PTCH1-206ENST00000421141 A0A087WZ62 844 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CHEK2O96017 543 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 FGGP02679 453 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CKBP12277 381 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 MMEL1Q495T6 779 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CES5AQ6NT32 575 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 RBBP8NLQ8NC74 664 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 FDXACB1Q9BRP7 624 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 A1CFQ9NQ94 594 aaKnown RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 GNRH1P01148 92 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 TAC1P20366 129 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 YWHAHQ04917 246 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 PTPN21Q16825 1174 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CXCL17Q6UXB2 119 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 TRIM54Q9BYV2 358 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 FBXL21Q9UKT6 434 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 H0Y626 953 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 PSMD3O43242 534 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 WEE2P0C1S8 567 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 ATP1A3P13637 1013 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 GARTP22102 1010 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 ATP6V0D2Q8N8Y2 350 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 PBXIP1Q96AQ6 731 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 FLT3LGP49771 235 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 NFE2Q16621 373 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 MTMR12Q9C0I1 747 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 HACD3Q9P035 362 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CDC23Q9UJX2 597 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CASTOR2A6NHX0 329 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 EFCAB14O75071 495 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 AP1G2O75843 785 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 NPTX2P47972 431 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 PLTPP55058 493 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 GJC2Q5T442 439 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 SCG3Q8WXD2 468 aaKnown RBP11.33□□□□□ -0.6
PTCH1-206ENST00000421141 DEFB118Q96PH6 123 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 CYP39A1Q9NYL5 469 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 SLC25A13Q9UJS0 675 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 PCDHB2Q9Y5E7 798 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
PTCH1-206ENST00000421141 IQANK1A0A1B0GTG1 560 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 GRK4P32298 578 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 RNF10Q8N5U6 811 aaKnown RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 UBE2Q2Q8WVN8 375 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 SYNDIG1Q9H7V2 258 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 AVPR1AP37288 418 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 KPNA1P52294 538 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 SATB1Q01826 763 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 CAV1Q03135 178 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 HERC6Q8IVU3 1022 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 TTC8Q8TAM2 541 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 LRRC8CQ8TDW0 803 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 USP13Q92995 863 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 C5P01031 1676 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 RALBP11234 206 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms