RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 TXKP42681 527 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 EPHA5P54756 1037 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 SATB1Q01826 763 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 SOX4Q06945 474 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 CSRP2Q16527 193 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 PRR23CQ6ZRP0 262 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 PDZD4Q76G19 769 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 DEPDC1BQ8WUY9 529 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 ZSWIM3Q96MP5 696 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 TRPV4Q9HBA0 871 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 PDRG1Q9NUG6 133 aa11.22□□□□□ -0.61
TNFAIP3-202ENST00000420009 TICRRQ7Z2Z1 1910 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 K7ESF4 209 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 SYN3O14994 580 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 HRO43593 1189 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 PFKFB2O60825 505 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 MED24O75448 989 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 LIG1P18858 919 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 CYP11B2P19099 503 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 ELF1P32519 619 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 CXCL12P48061 93 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 MLLT6P55198 1093 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 DMWDQ09019 674 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 PTGDRQ13258 359 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 SIM2Q14190 667 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 PPP2R5AQ15172 486 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 ATF7IP2Q5U623 682 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 TPGS2Q68CL5 300 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 PRR23BQ6ZRT6 265 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 WASF1Q92558 559 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 MSANTD3Q96H12 275 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 BRMS1Q9HCU9 246 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 TPCN1Q9ULQ1 816 aa11.21□□□□□ -0.61
TNFAIP3-202ENST00000420009 CHD6Q8TD26 2715 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 CHURC1-FNTBB4DL54 471 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 PODXLO00592 558 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 GDF9O60383 454 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 FOXD2O60548 495 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 FDPSP14324 419 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 CNR2P34972 360 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 VIPR2P41587 438 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 GRM5P41594 1212 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 FNTBP49356 437 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 EFNA5P52803 228 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 SRSF5Q13243 272 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 CYP4A22Q5TCH4 519 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 PADI6Q6TGC4 694 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 ALKAL1Q6UXT8 129 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 HS6ST3Q8IZP7 471 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 CEP120Q8N960 986 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 LEMD2Q8NC56 503 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 ZSCAN18Q8TBC5 510 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 NACC1Q96RE7 527 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 CDT1Q9H211 546 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 CEP72Q9P209 647 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 AFF4Q9UHB7 1163 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 TNFSF13BQ9Y275 285 aa11.2□□□□□ -0.62
TNFAIP3-202ENST00000420009 ARHGEF35A5YM69 484 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 H7C4K7 107 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 ZNF263O14978 683 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 KCNE1P15382 129 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 CCNE1P24864 410 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 RPA1P27694 616 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 PMLP29590 882 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 HOXA6P31267 233 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 ARPP19P56211 112 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 FCHO2Q0JRZ9 810 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 TWF1Q12792 350 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 LRRC32Q14392 662 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 C1orf228Q6PIY5 440 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 Q6ZS52 159 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 APBB1IPQ7Z5R6 666 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 LONP2Q86WA8 852 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 DIS3L2Q8IYB7 885 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 SHKBP1Q8TBC3 707 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 DDX1Q92499 740 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 RSPRY1Q96DX4 576 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 PTPRHQ9HD43 1115 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 TOPORSQ9NS56 1045 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 SLC38A7Q9NVC3 462 aa11.19□□□□□ -0.62
TNFAIP3-202ENST00000420009 MAFFQ9ULX9 164 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms