RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 SQORQ9Y6N5 450 aa7.4□□□□□ -1.22
CPS1-202ENST00000417946 TDRD15B5MCY1 1934 aaKnown RBP7.4□□□□□ -1.23
CPS1-202ENST00000417946 FNDC1Q4ZHG4 1894 aaPredicted RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 A0A1W2PQJ5 194 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 C9IYK1 514 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 M0QZ92 97 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PTGESO14684 152 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 ST8SIA5O15466 376 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 RECQL4O94761 1208 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 HLA-DRAP01903 254 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 CXCL10P02778 98 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 TPM3P06753 285 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 DLATP10515 647 aaKnown RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 UCHL3P15374 230 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 CD46P15529 392 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 ITGB8P26012 769 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 HNRNPH3P31942 346 aaKnown RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 MATR3P43243 847 aaKnown RBP eCLIP7.39□□□□□ -1.23
CPS1-202ENST00000417946 AFF1P51825 1210 aaKnown RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 GUCY2FP51841 1108 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 ADKP55263 362 aaKnown RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 SOX4Q06945 474 aaPredicted RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 PAK2Q13177 524 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 NAB2Q15742 525 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 ZBTB6Q15916 424 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 EXOC3L4Q17RC7 722 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 KRT39Q6A163 491 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 JADE1Q6IE81 842 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PHLDB3Q6NSJ2 640 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PDXDC1Q6P996 788 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 WDR59Q6PJI9 974 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 RNF19BQ6ZMZ0 732 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 GBP6Q6ZN66 633 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 MRPL10Q7Z7H8 261 aaKnown RBP7.39□□□□□ -1.23
CPS1-202ENST00000417946 UBR7Q8N806 425 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 C1orf127Q8N9H9 656 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 EHBP1Q8NDI1 1231 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 HELQQ8TDG4 1101 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 KREMEN1Q96MU8 473 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PHOX2BQ99453 314 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 MTMR12Q9C0I1 747 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 XYLT2Q9H1B5 865 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 CHST12Q9NRB3 414 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 CEP72Q9P209 647 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 CNTN3Q9P232 1028 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 FBXL5Q9UKA1 691 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PYCARDQ9ULZ3 195 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PLAGL2Q9UPG8 496 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 PCDHB2Q9Y5E7 798 aa7.39□□□□□ -1.23
CPS1-202ENST00000417946 TRIM43BA6NCK2 446 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 PES1O00541 588 aaKnown RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 PPEF2O14830 753 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 INPPL1O15357 1258 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 B4GALT3O60512 393 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 N4BP1O75113 896 aaKnown RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 ZNF623O75123 536 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 IL18RAPO95256 599 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 ASS1P00966 412 aaKnown RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 PNMA6AP0CW24 399 aaPredicted RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 KCNE1P15382 129 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 EN2P19622 333 aaPredicted RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 AKAP5P24588 427 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 IGFBP6P24592 240 aaPredicted RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 CYP2C18P33260 490 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 SMCPP49901 116 aaPredicted RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 MMP16P51512 607 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 GSDMDP57764 484 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 POLR2FP61218 127 aaKnown RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 FAM189BP81408 668 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 ZBED6P86452 979 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 NFX1Q12986 1120 aaKnown RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 BFSP2Q13515 415 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 TRIM14Q14142 442 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 MEA1Q16626 185 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 KYAT1Q16773 422 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 PLEKHG4Q58EX7 1191 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 SPOPLQ6IQ16 392 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 AGMOQ6ZNB7 445 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 TRAPPC11Q7Z392 1133 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 LRRC8AQ8IWT6 810 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 DRC7Q8IY82 874 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 USP38Q8NB14 1042 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 CCDC150Q8NCX0 1101 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 FBXL13Q8NEE6 735 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 CPLX3Q8WVH0 158 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 ANP32BQ92688 251 aaKnown RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 LPPQ93052 612 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 C18orf25Q96B23 403 aaPredicted RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 TRIM43Q96BQ3 446 aaPredicted RBP7.38□□□□□ -1.23
CPS1-202ENST00000417946 ABHD8Q96I13 439 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 SCLYQ96I15 445 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 ZFP42Q96MM3 310 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 ACAP3Q96P50 834 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 PANX2Q96RD6 677 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 SYT11Q9BT88 431 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 PI4K2AQ9BTU6 479 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 EDEM3Q9BZQ6 932 aa7.38□□□□□ -1.23
CPS1-202ENST00000417946 ASB7Q9H672 318 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms