RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 NSMFQ6X4W1 530 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 SLC47A2Q86VL8 602 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 C12orf56Q8IXR9 622 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 RFWD2Q8NHY2 731 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 GPR101Q96P66 508 aaPredicted RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 PAIP2Q9BPZ3 127 aaKnown RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 NYXQ9GZU5 481 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 FOCADQ5VW36 1801 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 CYP26A1O43174 497 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 ZWINTO95229 277 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 FDX1P10109 184 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 PSMC4P43686 418 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 CUL3Q13618 768 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 CERKLQ49MI3 558 aaPredicted RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 PABPC1LQ4VXU2 614 aaKnown RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 FAM91A1Q658Y4 838 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 ACAD10Q6JQN1 1059 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 FAM43BQ6ZT52 329 aaPredicted RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 OTOP1Q7RTM1 612 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 ARHGAP22Q7Z5H3 698 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 DAW1Q8N136 415 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 CCDC89Q8N998 374 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 CYP2W1Q8TAV3 490 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 WDR60Q8WVS4 1066 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 RBM41Q96IZ5 413 aaKnown RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 FGD4Q96M96 766 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 CFAP57Q96MR6 1250 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 FAM210AQ96ND0 272 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 TUBB6Q9BUF5 446 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 MAK16Q9BXY0 300 aaKnown RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 ZCWPW1Q9H0M4 648 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 KCNK13Q9HB14 408 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 DDX4Q9NQI0 724 aaKnown RBP8.34□□□□□ -1.07
VRK2-203ENST00000417641 SLAIN2Q9P270 581 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 PDP2Q9P2J9 529 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 ZNF212Q9UDV6 495 aa8.34□□□□□ -1.07
VRK2-203ENST00000417641 A0A1W2PPM1 405 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 A0A1W2PRG0 241 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 CAPN9O14815 690 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 CYP11B1P15538 503 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 KCNA3P22001 575 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 GCLMP48507 274 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 VAMP7P51809 220 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 RAP1GDS1P52306 607 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 POLE2P56282 527 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 DYNC1I2Q13409 638 aaKnown RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 NFIXQ14938 502 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 RINLQ6ZS11 566 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 CCNJLQ8IV13 435 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 C4orf33Q8N1A6 199 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.33□□□□□ -1.08
VRK2-203ENST00000417641 B4GALNT2Q8NHY0 566 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 MZB1Q8WU39 189 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 SKA1Q96BD8 255 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 DYDC2Q96IM9 177 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 NSL1Q96IY1 281 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 NR1H4Q96RI1 486 aaPredicted RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 RBM15Q96T37 977 aaKnown RBP eCLIP8.33□□□□□ -1.08
VRK2-203ENST00000417641 CCDC28BQ9BUN5 200 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 PLVAPQ9BX97 442 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 MMADHCQ9H3L0 296 aaPredicted RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 SYNCQ9H7C4 482 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 DMAP1Q9NPF5 467 aaPredicted RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 ARHGEF4Q9NR80 690 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 TAS2R1Q9NYW7 299 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 WRAP73Q9P2S5 460 aaPredicted RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 EXOC1LA0A1B0GW35 172 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 PIK3CDO00329 1044 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 ALOX15BO15296 676 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 PSMD10O75832 226 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 SLC1A1P43005 524 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 VPS41P49754 854 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 KRT72Q14CN4 511 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 LVRNQ6Q4G3 990 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 SMIM5Q71RC9 77 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 FAM178BQ8IXR5 827 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 ZSWIM2Q8NEG5 633 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 HELQQ8TDG4 1101 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 SEMA4DQ92854 862 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 PRR11Q96HE9 360 aaPredicted RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 HAPLN3Q96S86 360 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 SMC6Q96SB8 1091 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 NPHS2Q9NP85 383 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 AVENQ9NQS1 362 aaPredicted RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 METTL5Q9NRN9 209 aaKnown RBP8.33□□□□□ -1.08
VRK2-203ENST00000417641 STK32BQ9NY57 414 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 DAGLAQ9Y4D2 1042 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 SLC4A7Q9Y6M7 1214 aa8.33□□□□□ -1.08
VRK2-203ENST00000417641 ZNF831Q5JPB2 1677 aa8.32□□□□□ -1.08
VRK2-203ENST00000417641 NFASCO94856 1347 aa8.32□□□□□ -1.08
VRK2-203ENST00000417641 DNALI1O14645 258 aaPredicted RBP8.32□□□□□ -1.08
VRK2-203ENST00000417641 FOSP01100 380 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms