RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 HSPA4P34932 840 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 TXKP42681 527 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 TNK2Q07912 1038 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 NR5A1Q13285 461 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 UPP1Q16831 310 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 BMP2KLQ5H9B9 411 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 CDCA2Q69YH5 1023 aaPredicted RBP10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ZNF461Q8TAF7 563 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 SHKBP1Q8TBC3 707 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 KCNB2Q92953 911 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 C18orf25Q96B23 403 aaPredicted RBP10.3□□□□□ -0.76
LINC01238-201ENST00000416204 LRRC3BQ96PB8 259 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ADPGKQ9BRR6 497 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 AVENQ9NQS1 362 aaPredicted RBP10.3□□□□□ -0.76
LINC01238-201ENST00000416204 GTSE1Q9NYZ3 720 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 FBXL5Q9UKA1 691 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 FAM208BQ5VWN6 2430 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 IGF2RP11717 2491 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 SMIM28A0A1B0GU29 152 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 A0A1W2PRU2 124 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 SPECC1L-ADORA2AF8WAN1 911 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 PODXLO00592 558 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 TM4SF5O14894 197 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 KCNK5O95279 499 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 PROS1P07225 676 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 OR4Q2P0C623 313 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 ATF2P15336 505 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 FOXC1Q12948 553 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 LRRC32Q14392 662 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 CALCRLQ16602 461 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 MAPK6Q16659 721 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 CTXN3Q4LDR2 81 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 NT5DC1Q5TFE4 455 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 IQCEQ6IPM2 695 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 GALNT17Q6IS24 598 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 SLC8B1Q6J4K2 584 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 UNQ6494/PRO21346Q6UXR6 183 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 MAMSTRQ6ZN01 415 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 MFSD6LQ8IWD5 586 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 SLFN12Q8IYM2 578 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 TCEAL8Q8IYN2 117 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 ELMOD1Q8N336 334 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 DEPTORQ8TB45 409 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 DDX1Q92499 740 aaKnown RBP10.29□□□□□ -0.76
LINC01238-201ENST00000416204 PRIMPOLQ96LW4 560 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 ZNF512Q96ME7 567 aaPredicted RBP10.29□□□□□ -0.76
LINC01238-201ENST00000416204 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
LINC01238-201ENST00000416204 PGLYRP2Q96PD5 576 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 CCDC113Q9H0I3 377 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
LINC01238-201ENST00000416204 ASAH2Q9NR71 780 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 PCDHA12Q9UN75 941 aa10.29□□□□□ -0.76
LINC01238-201ENST00000416204 DSPP15924 2871 aaKnown RBP10.28□□□□□ -0.76
LINC01238-201ENST00000416204 RALGAPA1Q6GYQ0 2036 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 TMEM189-UBE2V1I3L0A0 370 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 ACKR2O00590 384 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 RPP40O75818 363 aaKnown RBP10.28□□□□□ -0.76
LINC01238-201ENST00000416204 SOAT2O75908 522 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 LYPLA2O95372 231 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 HARSP12081 509 aaKnown RBP10.28□□□□□ -0.76
LINC01238-201ENST00000416204 EVCP57679 992 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 SHC2P98077 582 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 FAM187BQ17R55 369 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 WDR5BQ86VZ2 330 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 IER2Q9BTL4 223 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 SMG9Q9H0W8 520 aaKnown RBP10.28□□□□□ -0.76
LINC01238-201ENST00000416204 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 NUB1Q9Y5A7 615 aa10.28□□□□□ -0.76
LINC01238-201ENST00000416204 TIMM13Q9Y5L4 95 aaPredicted RBP10.28□□□□□ -0.76
LINC01238-201ENST00000416204 DMXL2Q8TDJ6 3036 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 DCLK1O15075 740 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 MED24O75448 989 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 EPN2O95208 641 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 ZNF806P0C7X5 589 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 CPB1P15086 417 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 U2AF2P26368 475 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC01238-201ENST00000416204 PSMA5P28066 241 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 CTHP32929 405 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 CNR2P34972 360 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 RBM25P49756 843 aaKnown RBP10.27□□□□□ -0.77
LINC01238-201ENST00000416204 NOVA1P51513 510 aaKnown RBP10.27□□□□□ -0.77
LINC01238-201ENST00000416204 LIMK1P53667 647 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 SCRN1Q12765 414 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 DCAF4L1Q3SXM0 396 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 ATF7IP2Q5U623 682 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 RNF43Q68DV7 783 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 KIAA1211LQ6NV74 962 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 PADI6Q6TGC4 694 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 RUFY3Q7L099 469 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 FBXL16Q8N461 479 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 UROC1Q96N76 676 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 LSM14BQ9BX40 385 aaKnown RBP10.27□□□□□ -0.77
LINC01238-201ENST00000416204 C2orf40Q9H1Z8 148 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 CRISPLD1Q9H336 500 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms